| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0579 |
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| Symbol | mdoD |
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| ID | 8533714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 618276 |
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| End bp | 620030 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646382968 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_003262480 |
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| Protein GI | 261855197 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.38621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAC CGACTAAAAA ACAAACCGAA CAACAGCCGT CAGAACAAGC ACCGTCCATC
CTGACCACTC AGGAATATAC CCGACGGTCT TTTCTGTTCA CGCTCGCGAA TATCAGTGGA
CTGGTCGCAC TGGGATTTGG TAACGCACAA GCCGCACAAG AATCAACGGC TACGCCCGTT
AATGAGCCGA CCACGCCCAA AACGCCCGCA CCGGCAGCGG TCGCGCCCGA AAACGGGCTT
AAGTTTGCAG CGGCCAAGCC ATTCTCTTAT AAATCCTTGA TCGCCCGCGC CCAAGAAATG
GCCAAGAATC CGTATCAGGC GCCGCCCTCT CCGGCTGCCG ACGCGATCAA GACCATCAAT
TACGATGCAT CGGGCAAGAT CAAATTCAAC CCGAAAGATG CCTTGTGGGG CAAGTCAGGG
TCGGTTTATC CCATCACGTT CCGTCCCTTG GGTGAATACT TTCCCAAATC AGTTGCCATG
AACGTGGTCG AGGGCGATCA GGCACGCATG ATCGAATACC GCCCCGATTA CTTCACCATG
CCGGAAGACA GCCCGTTGCG TCAGGTACCG GCTGGGCAAT CCGGTATTTC CGGCTTCTGG
GTGCAGCGTT CCCGGCGTAT CGGCGACTGG ACGAAAAGCG AGCCGTGGGC CACCTTCCAG
GGAGCCAGTT ATTTCCGCGC CATATCGCGA CAAGGTCAAG TGGGCATGTC GGCGCGTGGC
ATCGCCATCA ACACCGGCTT GCCGCAAGGC GAGGAGTTCC CCGATTTCCG CGCGTTCTGG
TTTGAACCGG CAGCCAACGA AGGCGACCCG GTCGTGGTTT ACGCCCTGCT GGATGGCCCG
TCGATCACCG GCGCCTATCG CTTTGAACTG CGGTTCGATG GCGATACGGA AATGGTGATC
GAAAAACACC TGTTTATCCG CAAAACCATC GATCAACTTG GTATCGCCCC ATTGACATCC
ATGTTCTGGT ACAGCGAAAC ACCCAACAGC CACTTGCGCG GATGGCGGCC CGAAGTGCAC
GATTCAGACA CGCTGGTCGG TTGGCGTAGC GACAACGAAC ACTTCTGCCG CCCCCTGACC
AATCCGCCCA GTCTGGCCTA CTCTGCATTC GTCGACGAGC ATCCGCGTGG TTATGGTTTG
CTGCAACGCG ACCGCGATCC CTCGCATTAC CTTGATGGGG TTGGTTACGA AAAGCGTCCG
TCCGTCTGGG TAGAACCCAT CGTCGACAGC AAAGGCAACA ACAATTGGGG CAAGGGTTCG
GTTACCTTGA TCGAAATCCC GACCAACGAC GAAACCTTCG ATAACATGGT CGCCTTCTGG
CAAATCAAGG GCCCGGCACT TGCAGGTACC GCCCTGCAGT TCAAATACCG CCTGTACTGG
ACCGAGCACG AGCCTTTTTT CCCGCGCGAT CAACTGGCAC GCGCCGTCGC ATTGCGCGCC
GGTCCTGGCG GCAACTTTGG TGGCTCTCGC CCGGCCAACA CCGTCAAGCT CGTGATTGAA
TGGGATAGCC AGCTGTTCCA AGGGCATCAG CCCAAAGATG CTGTGTTCAC TATCACCAGC
TCAGCCGGAA AAACCGACAA CGTCCAAATC GACTGGGTAG CGGGCACGCC CCGCTGGCTG
ACTCAGTTCG ACCTGTTCGT CGACAGTGAT ACGCCAGTGG AACTCAATGG CGTGCTGACC
CTGAACGGCG AGGTCATCAG CGAAACATGG CTCTATCAAT TCCACCGCCA GAGCTTCGTT
CAAATGATGG CGTGA
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| Protein sequence | MSKPTKKQTE QQPSEQAPSI LTTQEYTRRS FLFTLANISG LVALGFGNAQ AAQESTATPV
NEPTTPKTPA PAAVAPENGL KFAAAKPFSY KSLIARAQEM AKNPYQAPPS PAADAIKTIN
YDASGKIKFN PKDALWGKSG SVYPITFRPL GEYFPKSVAM NVVEGDQARM IEYRPDYFTM
PEDSPLRQVP AGQSGISGFW VQRSRRIGDW TKSEPWATFQ GASYFRAISR QGQVGMSARG
IAINTGLPQG EEFPDFRAFW FEPAANEGDP VVVYALLDGP SITGAYRFEL RFDGDTEMVI
EKHLFIRKTI DQLGIAPLTS MFWYSETPNS HLRGWRPEVH DSDTLVGWRS DNEHFCRPLT
NPPSLAYSAF VDEHPRGYGL LQRDRDPSHY LDGVGYEKRP SVWVEPIVDS KGNNNWGKGS
VTLIEIPTND ETFDNMVAFW QIKGPALAGT ALQFKYRLYW TEHEPFFPRD QLARAVALRA
GPGGNFGGSR PANTVKLVIE WDSQLFQGHQ PKDAVFTITS SAGKTDNVQI DWVAGTPRWL
TQFDLFVDSD TPVELNGVLT LNGEVISETW LYQFHRQSFV QMMA
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