Gene Hneap_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0579 
SymbolmdoD 
ID8533714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp618276 
End bp620030 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content57% 
IMG OID646382968 
Productglucan biosynthesis protein D 
Protein accessionYP_003262480 
Protein GI261855197 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3131] Periplasmic glucans biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.38621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAC CGACTAAAAA ACAAACCGAA CAACAGCCGT CAGAACAAGC ACCGTCCATC 
CTGACCACTC AGGAATATAC CCGACGGTCT TTTCTGTTCA CGCTCGCGAA TATCAGTGGA
CTGGTCGCAC TGGGATTTGG TAACGCACAA GCCGCACAAG AATCAACGGC TACGCCCGTT
AATGAGCCGA CCACGCCCAA AACGCCCGCA CCGGCAGCGG TCGCGCCCGA AAACGGGCTT
AAGTTTGCAG CGGCCAAGCC ATTCTCTTAT AAATCCTTGA TCGCCCGCGC CCAAGAAATG
GCCAAGAATC CGTATCAGGC GCCGCCCTCT CCGGCTGCCG ACGCGATCAA GACCATCAAT
TACGATGCAT CGGGCAAGAT CAAATTCAAC CCGAAAGATG CCTTGTGGGG CAAGTCAGGG
TCGGTTTATC CCATCACGTT CCGTCCCTTG GGTGAATACT TTCCCAAATC AGTTGCCATG
AACGTGGTCG AGGGCGATCA GGCACGCATG ATCGAATACC GCCCCGATTA CTTCACCATG
CCGGAAGACA GCCCGTTGCG TCAGGTACCG GCTGGGCAAT CCGGTATTTC CGGCTTCTGG
GTGCAGCGTT CCCGGCGTAT CGGCGACTGG ACGAAAAGCG AGCCGTGGGC CACCTTCCAG
GGAGCCAGTT ATTTCCGCGC CATATCGCGA CAAGGTCAAG TGGGCATGTC GGCGCGTGGC
ATCGCCATCA ACACCGGCTT GCCGCAAGGC GAGGAGTTCC CCGATTTCCG CGCGTTCTGG
TTTGAACCGG CAGCCAACGA AGGCGACCCG GTCGTGGTTT ACGCCCTGCT GGATGGCCCG
TCGATCACCG GCGCCTATCG CTTTGAACTG CGGTTCGATG GCGATACGGA AATGGTGATC
GAAAAACACC TGTTTATCCG CAAAACCATC GATCAACTTG GTATCGCCCC ATTGACATCC
ATGTTCTGGT ACAGCGAAAC ACCCAACAGC CACTTGCGCG GATGGCGGCC CGAAGTGCAC
GATTCAGACA CGCTGGTCGG TTGGCGTAGC GACAACGAAC ACTTCTGCCG CCCCCTGACC
AATCCGCCCA GTCTGGCCTA CTCTGCATTC GTCGACGAGC ATCCGCGTGG TTATGGTTTG
CTGCAACGCG ACCGCGATCC CTCGCATTAC CTTGATGGGG TTGGTTACGA AAAGCGTCCG
TCCGTCTGGG TAGAACCCAT CGTCGACAGC AAAGGCAACA ACAATTGGGG CAAGGGTTCG
GTTACCTTGA TCGAAATCCC GACCAACGAC GAAACCTTCG ATAACATGGT CGCCTTCTGG
CAAATCAAGG GCCCGGCACT TGCAGGTACC GCCCTGCAGT TCAAATACCG CCTGTACTGG
ACCGAGCACG AGCCTTTTTT CCCGCGCGAT CAACTGGCAC GCGCCGTCGC ATTGCGCGCC
GGTCCTGGCG GCAACTTTGG TGGCTCTCGC CCGGCCAACA CCGTCAAGCT CGTGATTGAA
TGGGATAGCC AGCTGTTCCA AGGGCATCAG CCCAAAGATG CTGTGTTCAC TATCACCAGC
TCAGCCGGAA AAACCGACAA CGTCCAAATC GACTGGGTAG CGGGCACGCC CCGCTGGCTG
ACTCAGTTCG ACCTGTTCGT CGACAGTGAT ACGCCAGTGG AACTCAATGG CGTGCTGACC
CTGAACGGCG AGGTCATCAG CGAAACATGG CTCTATCAAT TCCACCGCCA GAGCTTCGTT
CAAATGATGG CGTGA
 
Protein sequence
MSKPTKKQTE QQPSEQAPSI LTTQEYTRRS FLFTLANISG LVALGFGNAQ AAQESTATPV 
NEPTTPKTPA PAAVAPENGL KFAAAKPFSY KSLIARAQEM AKNPYQAPPS PAADAIKTIN
YDASGKIKFN PKDALWGKSG SVYPITFRPL GEYFPKSVAM NVVEGDQARM IEYRPDYFTM
PEDSPLRQVP AGQSGISGFW VQRSRRIGDW TKSEPWATFQ GASYFRAISR QGQVGMSARG
IAINTGLPQG EEFPDFRAFW FEPAANEGDP VVVYALLDGP SITGAYRFEL RFDGDTEMVI
EKHLFIRKTI DQLGIAPLTS MFWYSETPNS HLRGWRPEVH DSDTLVGWRS DNEHFCRPLT
NPPSLAYSAF VDEHPRGYGL LQRDRDPSHY LDGVGYEKRP SVWVEPIVDS KGNNNWGKGS
VTLIEIPTND ETFDNMVAFW QIKGPALAGT ALQFKYRLYW TEHEPFFPRD QLARAVALRA
GPGGNFGGSR PANTVKLVIE WDSQLFQGHQ PKDAVFTITS SAGKTDNVQI DWVAGTPRWL
TQFDLFVDSD TPVELNGVLT LNGEVISETW LYQFHRQSFV QMMA