Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0575 |
Symbol | |
ID | 8533710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 611555 |
End bp | 612367 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646382964 |
Product | TonB family protein |
Protein accession | YP_003262476 |
Protein GI | 261855193 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.10213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCGC ACTTACATCA ACATACGGAT CCTTCGCGAC TACCTGGTCT TTCAAGGGGC AACAGCATTC TCTTGCTTGG CCTTGTTATT GGACTGCACG GAGTTGTGCT CTATGCCCTA TTGCGGAGCG AATCGATATC GCAACCTGCG CAAGTCAGTG CGCCGGAAGC AGTGATGCTG GGTACATTGT TGACGCAACC TTCGCCGGTG ATAGAGCCTG AACCAACTCC TGAACCAACT CCTGAACCAA CTCCTGAACC AACTCCTGAA CCAGCTCCTG CTCCTGCTCC AGAACCTGAA CCGAAACCGG CTCCCAAGCC AGCTATCACT GAACCAAAAG CAAAACCAGA GGCAAAACCC CTTCCACGCC CAACGGTGAA AAAAAGTCCA CCTCAAACCA AGGCTCGTCC GACCAATAAA GCAGTGGAGT CGTTAGCGAC GGTTCAACAT TCTTTATCGG ATTCGTCCCA AGCGGAGAAA GCCCCAACAA TCGCAACGAA TCCCGTTCCG GTGCAAACAC CGCCGCCCGT TGTTCAACCA AGATTGGATG CGCGCGCAGG CAACAACCCG CCGCCGGATT ATCCTCGTGC TGCCCGCAAG CGGGGCCAGG AGGGTACGGT CGTGTTATCT CTTGTGATTG GGGCAGACGG CAGTGTGCAG GATGTCAGCG TGAAGCGCTC CAGCGGTTAC CCGCTTTTGG ATCAGTCGGC CGTTAAAGCC ATACGGCGCT GGCACTTTCA TCCGGCAACC CAAGGGGGTA AAGCCATCAG CTGGAACTAC TTACAGCCCA TCAAGTTTTC TCTCACCGAT TAA
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Protein sequence | MKAHLHQHTD PSRLPGLSRG NSILLLGLVI GLHGVVLYAL LRSESISQPA QVSAPEAVML GTLLTQPSPV IEPEPTPEPT PEPTPEPTPE PAPAPAPEPE PKPAPKPAIT EPKAKPEAKP LPRPTVKKSP PQTKARPTNK AVESLATVQH SLSDSSQAEK APTIATNPVP VQTPPPVVQP RLDARAGNNP PPDYPRAARK RGQEGTVVLS LVIGADGSVQ DVSVKRSSGY PLLDQSAVKA IRRWHFHPAT QGGKAISWNY LQPIKFSLTD
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