| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0562 |
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| Symbol | |
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| ID | 8533697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 596841 |
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| End bp | 597224 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646382951 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_003262463 |
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| Protein GI | 261855180 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00428193 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGGTT CCGGTACGGA TGAATCTGTA CTGTATGCGA GTGCCCCGAA GGGCGACGCT
GCAACTGTGT ACTTCGGTTT CGATAAGTAC AATGTTGACC CTTCTTATCG TCCGATGCTG
CAACAGAACG CTGCTTTCCT TAAAGAAAAC ACACAGCGTC ATGTTTTGGT AGAAGGCAAT
ACTGATAACC GCGGCAGCCG TGAATACAAT ATCGCGTTGG GTGAGAAGCG TGCGGTAGCG
GTGCGTGATA CTTTGCTGGC TGATGGTGTT GCGCCCTCTC AGGTGGACGT CGTGAGCTAT
GGCGAAGAGC GTCCGGCTGT CGAAGGGAAT AACGAAGCGG CCTGGGCGAA AAACCGTCGC
GCTGATCTGG CTTACGGCAA GTAA
|
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| Protein sequence | MNGSGTDESV LYASAPKGDA ATVYFGFDKY NVDPSYRPML QQNAAFLKEN TQRHVLVEGN
TDNRGSREYN IALGEKRAVA VRDTLLADGV APSQVDVVSY GEERPAVEGN NEAAWAKNRR
ADLAYGK
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