| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0550 |
|---|
| Symbol | |
|---|
| ID | 8533683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 585700 |
|---|
| End bp | 586578 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646382937 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003262451 |
|---|
| Protein GI | 261855168 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAATC ACGCTGAAAT CGCGGCTCTG AAATGGGATG TACGACAACG CCTCACGCTC
TTGGAAAGCA CGCTGTTGCT CACGGGTTGG GTACGCACGC AGGCACTCGT CGAGACGTTC
AGCATCAGTC GAGCTCAGGC ATCCAAAGAT TTCGCGGTGT ACATGAGCCT TCGCCCCGAT
AACCTCAAGT ACAACAAATC GCTGAAATAT TATGAAGCAG GAGACGCGTT CACCCCGCTA
TTGCTCACCG GTTCGGCCAC GGATGTACTC AATGCCCTGC AGGTGGTCAA TCCACAACAA
ACACCCGTGG TTACCCTGTC TGCCGCACTG CCAGCCATAC AGGTGGTACA GCCACTGGAT
CGGCAATTGG ATTGGTCGGT TTTAAGGGTA GTGAGTCAGG CCATCTACCA AAAACGAAAA
CTCAAGGCGG CGTACCAGTC CATGAATCGC AATGAACCAA CCGAGTTGAC GCTCTCACCG
CATCATTTGG TGTTCAGTGG TTTTCGCTGG CATGTACGCG CATTCAGTGA CACGCATCAG
GCATACCGTG ATTTCGTATT GGCACGATTC AGGGGAGAGC CACCCCAATT GCTGAATGAA
ACTGCGATCT CGGGTGATCA CGATGAGGCA TGGCATCAAA CTATTGACGT TATCATCGAG
CCGCATCCGG GCTTGCCGGA AAGTCAGCGA AAGATTCTCG CCGAAGACTA CGGAATGATC
GATGGAACAC GTTGCGAGCC CGTTCGTCAG GCCTTGCTGC CCTACTTCTT GCGGTTGATG
CAAATTGAAC CCGAACGACA ACACCCCGAC CCAAAAATCC AGCAGATCAT CCTGAAAAAC
CCGGAACAGG TTCAACCGTT TTTGTGGCGT AACAATTAG
|
|---|
| Protein sequence | MVNHAEIAAL KWDVRQRLTL LESTLLLTGW VRTQALVETF SISRAQASKD FAVYMSLRPD
NLKYNKSLKY YEAGDAFTPL LLTGSATDVL NALQVVNPQQ TPVVTLSAAL PAIQVVQPLD
RQLDWSVLRV VSQAIYQKRK LKAAYQSMNR NEPTELTLSP HHLVFSGFRW HVRAFSDTHQ
AYRDFVLARF RGEPPQLLNE TAISGDHDEA WHQTIDVIIE PHPGLPESQR KILAEDYGMI
DGTRCEPVRQ ALLPYFLRLM QIEPERQHPD PKIQQIILKN PEQVQPFLWR NN
|
|---|
| |