Gene Hneap_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0537 
Symbol 
ID8533664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp570959 
End bp571924 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content53% 
IMG OID646382918 
Producttol-pal system protein YbgF 
Protein accessionYP_003262438 
Protein GI261855155 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0161881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGTT TGAAAATAAA ACGTAACGCA AAAAAAATCA CTGTGTTAGC CGTATTTGGT 
ATGGTCATGA CACAGCCCAC TTGGGCGCAG ACACCACCCG GTTGGCTAAA TTGGAGTGAT
AAATCAGACG CAGCGCCAGC GGCCACTACG CAAGCACCCG AAACGGATGC GCAGTCAGCA
ACACCGCAGC CACTTTCATC GCAGCCACTG GGTACAGGTG AAACGGGTGT AAATACGGCT
TCTGGGCAGA CGGTTATTAT TCAAAATCTG CTGGATAGTG TGTCGCGGTT GCAAGAACAG
GTCCGGGATC TTCGCGGTCA AAACGAGGTG CAGGAAAATC AGATCCAGCG GCTGCAAAAA
GCGCAACAGT CCGCATTCAG TTCCTTTGAT GATCGTCTGT CAAAACTTGA ACAAACGGGT
GGTAGTACTT TAGCGCCGTC TGCACCGGTT CCCCCAAGCG TTCCGGCAAC TAAGGAACCT
GCCGCTTCAG TGCCGACAGC GCCTGCGCCA GCATCCTCCG CTTCTGCAGC GCCCGCCGCA
TCGCCTGCGC CTGCAACCAG TCAAGATGCA GCAGCCACTG CAAAGCAGCA GGCACTGTAT
AACGCAGCGT TCGCTCAGTT AAAGGATGGG CAGTACGATC AGGCAATCAC CGGATTTCAG
GCCGCTATCG ATGCTGATCC GCAGGGTCAA TGGACGCCAA GCGCACTGTT CTGGCAGGGC
GAGACTTATT ACGTAGAGCA AAAGCGGGAT AAGTCTGAAG CGGCATATCA GAAAATATTG
ACCCAATTCC CGAATAGCGA CCGAGTGCCA GATGCTCTGC TTAAAACGGG CTACATCGCC
TACGACGCAA ACAAAAACAA ACAAGCTCGG GATATTTTCC AGCAGGTGAT CAGCAAATAT
CCTCAAAGTC AGGCGGCCAA TCTGGCAAAA CAGCGGTTAG CGCGCATGGA TGCTGAAAAA
AGATGA
 
Protein sequence
MNRLKIKRNA KKITVLAVFG MVMTQPTWAQ TPPGWLNWSD KSDAAPAATT QAPETDAQSA 
TPQPLSSQPL GTGETGVNTA SGQTVIIQNL LDSVSRLQEQ VRDLRGQNEV QENQIQRLQK
AQQSAFSSFD DRLSKLEQTG GSTLAPSAPV PPSVPATKEP AASVPTAPAP ASSASAAPAA
SPAPATSQDA AATAKQQALY NAAFAQLKDG QYDQAITGFQ AAIDADPQGQ WTPSALFWQG
ETYYVEQKRD KSEAAYQKIL TQFPNSDRVP DALLKTGYIA YDANKNKQAR DIFQQVISKY
PQSQAANLAK QRLARMDAEK R