| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0536 |
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| Symbol | |
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| ID | 8533663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 569577 |
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| End bp | 570884 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646382917 |
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| Product | Tol-Pal system beta propeller repeat protein TolB |
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| Protein accession | YP_003262437 |
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| Protein GI | 261855154 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00175631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGC GCATTCAACG CTGGGGTTTA TGGATTCTGA GCGGATTGCT GTTCCTCGCG
CCGGCGGTAA GCCAGGCCGA ACTGAATATT GTGATCAGTG GTGGACAGGA AAGCGGTGTT
CCCATTGCCG TGGTTCCGTT TTCTACAACC ACAAACACGG ACTTTGCTTC GATCATTGAT
GCCGATCTGG CGCGTTCGGG GCAGTTTGCG CCATTAACCA CAGATCAGAT GCCGAGTCAG
CCGTCTGCAC CGGAGCAAGT CCAGTTCGAT CAATGGCGTA CGGGCAAGGC GCAATATCTG
GTCGTCGGCA AGGTGGTTCA GCAGGGCGGT AATTATCAGG CAACTTTTTA TTTGTTGAAC
GTTACCAACG GCCAACAAAT GACCGGGCGG GTGATCTCAG CACCGGTTTC CGCCGCACGC
AGCATTGCAC ACCGAATTGC TGACATCATC TTCAAACAAA TCACCGGCGT GCGCGGTGCA
TTTGATACGA AGATCGCCTA CGTGACCGAA ACAGACGGTC CGGGCAAAAA ACGGCGCTAT
ACCTTGGAAG TGGCTGATTC GGATGGTGCC AATCCACAGA CGGTTTTGAG TTCCAACTTT
CCACTGATGT CGCCGACCTG GTCGCCAGAT GGAAGTAAAC TCGCCTATGT ATCCTTCGAA
GGACGTCGCT CAGGTATCTG GGTTCAGGAC TTGCGCACAG GCCAGCGTTA TCAACTAACA
AAATTTCCGG GCATCAATGG GGCGCCAAGT TGGTCGCCAA AGGGCAATAA GATTGCTATC
ACACTGTCCA AATATCACAG CCCGAATATT TATGTGGTCG ATCTGGATAC GCGAAATCTG
ACACAAGTCA CCAATGATGG CTCGATCAAT ACGGAAGCCT GCTGGTTGCC GGACAACCAG
ACCTTGGTAT TCACTTCGGA TCGTTCCGGT TCGCCACAAT TATTTGAAAA GACGGTGGGC
ACTTCTTCTG CTCAGCGTCT GACGTTCGGT TTGTCGTATG CGGCAGGTGG TGCAATTTCT
CCTGATGGTA AAACACTGGC CCTGTTGGCG GGTGGCAATG GCGGTTTCCG TGTTGCCGTT
CAGTCTTTGT CGGGGGGGGG TAGTGATTTG CGCTACATCA GTAACGGCGG TTCAGAGGAG
CGGCCGAGTT TCGCGCCTAA CGGATCGATG CTGATCTACG CATCACAGGT AGGCGGAAGC
TCGGTGTTGA AAGTCAGCCC TGTTTCGGGT GGTGAGAGCC AGACCTTGCG CTTTGCCCGC
GGCAAGGTGC GTGACCCAGC CTGGGGACCA TTTCAAGGCG ATGAATAG
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| Protein sequence | MKARIQRWGL WILSGLLFLA PAVSQAELNI VISGGQESGV PIAVVPFSTT TNTDFASIID
ADLARSGQFA PLTTDQMPSQ PSAPEQVQFD QWRTGKAQYL VVGKVVQQGG NYQATFYLLN
VTNGQQMTGR VISAPVSAAR SIAHRIADII FKQITGVRGA FDTKIAYVTE TDGPGKKRRY
TLEVADSDGA NPQTVLSSNF PLMSPTWSPD GSKLAYVSFE GRRSGIWVQD LRTGQRYQLT
KFPGINGAPS WSPKGNKIAI TLSKYHSPNI YVVDLDTRNL TQVTNDGSIN TEACWLPDNQ
TLVFTSDRSG SPQLFEKTVG TSSAQRLTFG LSYAAGGAIS PDGKTLALLA GGNGGFRVAV
QSLSGGGSDL RYISNGGSEE RPSFAPNGSM LIYASQVGGS SVLKVSPVSG GESQTLRFAR
GKVRDPAWGP FQGDE
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