Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0511 |
Symbol | |
ID | 8533638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 542470 |
End bp | 543552 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646382893 |
Product | ApbE family lipoprotein |
Protein accession | YP_003262413 |
Protein GI | 261855130 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACCC GCCGCCAATT CCTGACCACC GTGGCGGGCT TAACTGTCAG CCCCCTGTTG CTTTCGGGAT GCAGCACGCA TCAAACGCAG ATTGTTGAAG AAGGGTTCAC TGTCTTCAAT ATGCCGATGA CGCTGCGATT CGCCAATGAG TCGCCCAAAG CCATCACACA GACGGTGAAT GCCGCTGCGG GCATCGTCGA GCCACTGTAC CGACGCATTC ACCCCTGGAA ACCGAGTGAC CTCACCCGGC TGAACGCCCA ACTGGCCACC CATGGCAAGG CGACGACAAC GCCCGAGATC ATCGACCTGA TCAACATATC CCGAACGCTG TTTGAAGGCA CCGATGGCGC GTTCGACCCC ACCATTGGTG CGCTGATTGC CGCCTGGGGG TTTCACAACA GCCACGTCAC CGAATCGCAT CCGCTGCCGA CCGAAGCGTT CCTCGATGCC TGGCTGGAAC ATCGCCCCAC TATGAACGAC GTGCATGTCG ACGGATTGGA AGTAAGCGTC ACCAACCGAC GGGTTCAATT CGATTTCAAC GGTTGCGCGG AAGGCTACGC CGGACACCTC GTGATCCAGG CAGCCGAAAA AGCAGGCATC ACGAACTGCC TGTTCGACAC GGGCGGCGAT CTGTTCATGA TCGGGCAGGC AGGCGACAAG CCCTGGCACT TGGCCATCGA AAACCCCTTG AAGCGGGGCG TACTCGCCAG TATTGATCTT TCAGGGCATA CGGCACCCAA CGGCCACCAG TCCCTCAACA GTTCGGGTAA CTACGAACAT CGTTTTATCT ACAAAGGCGA AGCGTATTCG CATATCATCA ACCCGAAAAC CGCGCGCCCC GTTCGCCGTA TTGCGGGCAG CACGGTATGG GCAAATCATT ATGCGATTAG CGATGGCGCG ACCAAGGGTG CCATGATGCT GGAACCGGAA CAGGTGCCCG ACATGGTGCG CAAACTCAAG CTTGACGGCG TGCTGTTCAT GGAAGAAACC GGCCAACTCT GGATGAATCA ACGTATGCAG GACAAGTTGC GCCTCGTCGA ACCTGTCGCC GGTCTGACCG CCACTCACCT CATCACGGAG TAA
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Protein sequence | MPTRRQFLTT VAGLTVSPLL LSGCSTHQTQ IVEEGFTVFN MPMTLRFANE SPKAITQTVN AAAGIVEPLY RRIHPWKPSD LTRLNAQLAT HGKATTTPEI IDLINISRTL FEGTDGAFDP TIGALIAAWG FHNSHVTESH PLPTEAFLDA WLEHRPTMND VHVDGLEVSV TNRRVQFDFN GCAEGYAGHL VIQAAEKAGI TNCLFDTGGD LFMIGQAGDK PWHLAIENPL KRGVLASIDL SGHTAPNGHQ SLNSSGNYEH RFIYKGEAYS HIINPKTARP VRRIAGSTVW ANHYAISDGA TKGAMMLEPE QVPDMVRKLK LDGVLFMEET GQLWMNQRMQ DKLRLVEPVA GLTATHLITE
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