| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0500 |
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| Symbol | |
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| ID | 8533627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 533871 |
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| End bp | 535760 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646382882 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003262402 |
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| Protein GI | 261855119 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAG TGCCGAATGA TTTTTTAGCT AAAACGGCCG GGTTGTCCGA ATCGGTCATC
GCACCGTTTC CGGCCAGTGC CAAAATTTAC CAGACAGGTT CGCGCCCAGA CATTCGCGTG
CCGATGCGTG AGGTTACTTT AACGCCGACC CGCAGTGATC GCGGCGTGGA AATCAATCCG
CCGATCACGA TTTACGATAC CTCCGGCCCG TACACCGACC CTGCGGTCAA AATTGACCTG
CTCAAGGGGT TAGAGCCTCT GCGCGAGAGC TGGATTGCCG AGCGTGCCGA TACCGAAACG
CTCAGCGGCC CGTCGTCTGA TTATGGTTTG GCGCGTTTGA ATGATCCTAA AACCGCTGGC
TTGCGTTTCG GTCATATCCG CACACCCATC AAGGCGAAAG CGGGCAAAAA CGTCTCGCAG
ATGCATTACG CCCGCCAAGG CATCATCACG CCTGAAATGG AATTCGTGGC AATCCGCGAA
AACAACCGCC TGCAAGAAAT GCGTGCCGAT CCGCGCTACA AAGCGCTGCT GCGTCAGCAC
AAGGGCGAGT CTTTCGGAGC ATCCATTCCC GATGTCATCA CGCCGGAGTT TGTGCGCGAC
GAGATCGCCC GTGGCCGCGC CATTATCCCG GCGAACATCA ATCACCCCGA AATCGAGCCG
ATGATTATCG GGCGGAATTT TCGCACCAAA ATCAACGGCA ATCTGGGCAA TTCCGCCACC
ACTTCCGGTA TCGCCGAAGA AGTCGAAAAG ATGGTCTGGG GCATTCGCTG GGGCGCGGAT
ACCATCATGG ATTTGTCCAC CGGCAAGAAC ATCCACGAAA CCCGCGAATG GATTTTGCGC
AATGCACCCG TGCCGATCGG CACCGTGCCG ATTTATCAGG CATTGGAAAA GGTCAACGGC
AAGGCCGAAG ACCTAACTTG GGAGATTTTC CGCGATACCT TGATCGAACA GGCGGAGCAG
GGCGTGGATT ACTTCACCAT CCACGCCGGT GTGCTGCTGC GCTATGTGCC GCTGACGGCC
GAGCGTGTGA CGGGCATTGT GTCCCGTGGT GGCTCGATCA TGGCCAAATG GTGCCTGGCG
CATCATCAAG AGAGCTTTTT GTACACGCAT TTCGAAGAGA TTTGCGAGAT TATGAAAGCC
TACGATGTTT CATTCTCATT GGGCGATGGC CTGCGCCCCG GCTGCCTTGC TGATGCGAAC
GATGCGGCGC AGTTCGGCGA ACTGCAAACG CTGGGCGAGC TGACCAAAAT CGCTTGGGAA
CACGATGTGC AGGTAATGAT CGAAGGCCCC GGCCACGTGC CGTTGCAGAT GATCAAAGAG
AACATGGACA AAGAGCTGGC CGATTGCTAC GAGGCGCCGT TTTATACCTT GGGCCCGCTG
GTCACCGACA TCGCGCCCGG ATATGACCAC ATCACCAGTG GCATCGGCGC GGCGAACATC
GGTTGGTACG GTACCGCTAT GCTGTGCTAT GTCACGCCAA AAGAGCATCT GGGCTTGCCG
GATAAAGACG ACGTGCGCGA AGGCGTGATT ACTTACAAGA TCGCCGCCCA CGCTTCCGAT
TTGGCCAAGG GGTTTCCCGG CGCGCAGGTG CGCGACAACG CTCTATCCAA GGCGCGTTTT
GAATTCCGTT GGGCCGACCA GTTCAATCTG GGTCTCGATC CGGAGCGCGC GCGTGAATAC
CACGATGAAA CTTTGCCAGC CGAAGCGCAC AAGGTGGCGC ATTTTTGCTC AATGTGCGGC
CCGCATTTCT GCTCGATGAA AATCACCCAA GATGTGCGTG ACTACGCAGA AACACTGGGT
GTCGACGAGA TCGAAGCCAT CAAAAAAGGC ATGGAAGAAA AGTCGATTGA ATTTGTGAAA
AAAGGCGCCG AGGTGTACGG TCGCATCTGA
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| Protein sequence | MSAVPNDFLA KTAGLSESVI APFPASAKIY QTGSRPDIRV PMREVTLTPT RSDRGVEINP
PITIYDTSGP YTDPAVKIDL LKGLEPLRES WIAERADTET LSGPSSDYGL ARLNDPKTAG
LRFGHIRTPI KAKAGKNVSQ MHYARQGIIT PEMEFVAIRE NNRLQEMRAD PRYKALLRQH
KGESFGASIP DVITPEFVRD EIARGRAIIP ANINHPEIEP MIIGRNFRTK INGNLGNSAT
TSGIAEEVEK MVWGIRWGAD TIMDLSTGKN IHETREWILR NAPVPIGTVP IYQALEKVNG
KAEDLTWEIF RDTLIEQAEQ GVDYFTIHAG VLLRYVPLTA ERVTGIVSRG GSIMAKWCLA
HHQESFLYTH FEEICEIMKA YDVSFSLGDG LRPGCLADAN DAAQFGELQT LGELTKIAWE
HDVQVMIEGP GHVPLQMIKE NMDKELADCY EAPFYTLGPL VTDIAPGYDH ITSGIGAANI
GWYGTAMLCY VTPKEHLGLP DKDDVREGVI TYKIAAHASD LAKGFPGAQV RDNALSKARF
EFRWADQFNL GLDPERAREY HDETLPAEAH KVAHFCSMCG PHFCSMKITQ DVRDYAETLG
VDEIEAIKKG MEEKSIEFVK KGAEVYGRI
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