| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0488 |
|---|
| Symbol | |
|---|
| ID | 8533615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 517445 |
|---|
| End bp | 518881 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646382870 |
|---|
| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| Protein accession | YP_003262390 |
|---|
| Protein GI | 261855107 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATC CATTCATATT AAGTGGCGGC GCAGGCACCC GTTTGTGGCC CGCTTCACGC
AAGGCATTCC CCAAACCGTT TATGCCCTTG GTCGATGGGC AGACCCTGTT TGATAAAACG
ATTGAACGGA TCAAACAGCT TCCCTCTGCC GGGCCGTTGA CCGTAATCAC TAATGAATCG
CTCCGTTTCC TCACGGCGGA TGCTCTGCGT GGCTCTGTAG CCAAACAGCC ACGTTTATTG
CTGGAACCAA CCGGGAAAAA TACGGCAGCA GCAATTGCTT TGGCCGCACT GGATTTGCAA
ATTCGTGCAG GCTCTGACGC ATTGATGCTC ATCTTGCCAG CAGATCATCT GATCGCGGAA
GTTGGCGCAT TTTCCGAGGC CGTTCAAGTG GCGGAAAACG TCGCTAATCA AGATTGGTTG
GTCACCTTTG GGATCACTCC GCAATCACCG GAAACCGGCT TCGGTTATAT AGAGCGTGAT
GCGCAACCAC TCGCTCTTGA AGAAGGTGTC GCTTATCGCG TTCGCAAGTT TGTTGAAAAA
CCGGATCGTG AGACGGCTCA AGCGTATATC GACTCAGGTC GCTACTCCTG GAATGGCGGC
ATGTTCTGCT TCAAGGTCAG CACGATCCTC GCCGAGTTCG AACGCCATGC GCCCGAGTTG
CTCGCGGCTT GCCAGGTCGC GGTTGAGCAT GCCAATCAGA TACACGTGGC CGGAATGGAC
ATGGTTGAAT TCAAGGCAGA TGATTTTGAA CGAATGGCGG ATATCTCAAT TGATTACGCC
ATCATGGAGC GCTCCGAGCG CGTTGCCGTT GTTGCCGCCG ATATGGGTTG GTCCGACATC
GGTTCCTGGA CAGCTTTTGC CGATGCGTCC CCTTCTAATG CCGAGGGTAA TGTATTTGAT
GGGGAAGTGA TCGCTATCAA CACAAATAAC TGTCTTGTTC GTAGTCCGCA TCGCCTCGTG
GCGACCGTGG GTGTCGAAAA TCTAATTGTG GTTGATACGC CCGACGCATT GTTAATCGCC
CACAAAGATC ACGCTCAAGA CGTGCGCGAC GTGGTAGCCG AACTCAAGGC GCGCGGTCAT
GAAAGCCATC TTCTTCACCA AACCGTACAC CGCCCTTGGG GCACCTATAC CGTGCTTGAA
GAAGGCGAGC GTTTCAAAAT GAAGCGCATC GAAGTCAAAC CCGGCGCAAC GCTCTCCTTG
CAGATGCACC ATCATCGCAG TGAGCACTGG ATTGTCGTTA ACGGCATGGC GCGCGTCACC
AATGGCGACA AGGTGTTTTT ATTGAATACC AATGAATCTA CATTCATTCC CGCAGGGCAT
ATGCACCGAT TGGAAAACCC CGGTGTGATC AATCTGGTGA TGATCGAAGT GCAAAGCGGC
GATTACTTGG GTGAAGACGA CATTGTCCGC GCGCAAGACA ACTATGGGCG CTCTTGA
|
|---|
| Protein sequence | MIYPFILSGG AGTRLWPASR KAFPKPFMPL VDGQTLFDKT IERIKQLPSA GPLTVITNES
LRFLTADALR GSVAKQPRLL LEPTGKNTAA AIALAALDLQ IRAGSDALML ILPADHLIAE
VGAFSEAVQV AENVANQDWL VTFGITPQSP ETGFGYIERD AQPLALEEGV AYRVRKFVEK
PDRETAQAYI DSGRYSWNGG MFCFKVSTIL AEFERHAPEL LAACQVAVEH ANQIHVAGMD
MVEFKADDFE RMADISIDYA IMERSERVAV VAADMGWSDI GSWTAFADAS PSNAEGNVFD
GEVIAINTNN CLVRSPHRLV ATVGVENLIV VDTPDALLIA HKDHAQDVRD VVAELKARGH
ESHLLHQTVH RPWGTYTVLE EGERFKMKRI EVKPGATLSL QMHHHRSEHW IVVNGMARVT
NGDKVFLLNT NESTFIPAGH MHRLENPGVI NLVMIEVQSG DYLGEDDIVR AQDNYGRS
|
|---|
| |