Gene Hneap_0466 details

Gene Information

• Locus tag: Hneap_0466
• ID: 8533590
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 492545
• End bp: 493210
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 646382846
• Product: protein of unknown function UPF0005
• Protein accession: YP_003262369
• Protein GI: 261855086
• COG category: [R] General function prediction only
• COG ID: [COG0670] Integral membrane protein, interacts with FtsH

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTGC AAAATTCAAC CGTAAGTCCG CGTCGAGAAT CCTTGCTGGC GACCAACCAG 
CTGATTCGCA ACACCTACCT GATGTTATCG ATGACCTTGG TGTTCAGTGC CGTCATGGCC 
GGCGTATCCA TGTGGATGAA CCTGCCGCCG ATGATTTCGC TCATTGCGAT GTTCGGTTCG 
ATGGCATTGA TCTGGTTTGT CCTGCCCCGC ACGGCACGCT CCGGCGCGGG TCTGGTGACC 
GTATTCGCCA TCACCGGCCT GATGGGGTTG GGCCTGGGGC CAACCATCAA TTATTACCTG 
CACCTTGAAG GCGGTGACCA GATCGTTATG ACGGCTTTGG GCGGCACCGG TGCGATTTTT 
CTGGCGCTGT CTGCGTATGC GCTTATCTCT CGCCGTGATT TTTCGTTCAT GGGTGGCTTT 
TTGATGGTCG GCATGATCGT GGTGCTGCTA GCCATGCTCG GGAACTTGTT TTTCCATTTG 
CCGGCATTGT CCATGGCGCT TTCCGGCGCG GTCATCCTGT TGATGAGTGG ATTTATCTTG 
TTCGACACCA GTCGCATGGT GAACTCCGGT GAGGACAACT ACCTGATGAT GACGGTGAGT 
TTGTATCTCA GCATCTTCAA CATCTTCGTC AGTTTGCTGA ATATTCTGGG TGCTAGCCGG 
GACTGA 

 

Protein sequence

MSLQNSTVSP RRESLLATNQ LIRNTYLMLS MTLVFSAVMA GVSMWMNLPP MISLIAMFGS 
MALIWFVLPR TARSGAGLVT VFAITGLMGL GLGPTINYYL HLEGGDQIVM TALGGTGAIF 
LALSAYALIS RRDFSFMGGF LMVGMIVVLL AMLGNLFFHL PALSMALSGA VILLMSGFIL 
FDTSRMVNSG EDNYLMMTVS LYLSIFNIFV SLLNILGASR D