| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0452 |
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| Symbol | |
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| ID | 8533575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 477108 |
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| End bp | 478082 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646382832 |
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| Product | D-alanine/D-alanine ligase |
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| Protein accession | YP_003262356 |
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| Protein GI | 261855073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0742321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGATC CCGCCGTATT TGGCCGCGTG TTGTTGCTGT TGGGCGGTTG GTCGTCCGAA
CGAGTTATTT CGCTCAAAAG CGGTGAAACC GTTCTGGGCG CGCTGCAACG TGCAGGCATC
GATGTGACGG CTATGGATGT CCGGCGCGAT TTTCTGCCCG AGTTGTTGGC TGCGCACCAA
GCCAAGCCCT TCGACCGTGC GTTCATCATC CTGCATGGCC GCGGTGGCGA AGACGGTCAG
ATTCAGGCTG TTCTTGAGTT GCTGGGTATT CCCTACACGG GGACTTCGAT GGGCGGTTCC
GCCATCGGGA TGGACAAGCT CGCCTGCAAG CGGATCTGGC GTGGCGAAGG TTTGCCAACA
CCGCCTTGGG CGGTCGTGGC TACCGAGATA GAAGCCCATC GCGCATTGGA TTCTCTTGGT
TTGCCGGTGA TGGTCAAACC GGTGGCAGAG GGGTCGAGCG TCGGTGTCGC CAAGGTTGAT
CAACCGGATC AGTTGGCGGC CGCTTTCCGC GAAGCAGCAC GTTATGGACA GGTGATGATG
GAGCGCTACA TCCGTGGCGG CGAATACACC GTTTCACTGC TGGGTGGCCG CGCATTACCC
GTGATTCGAC TCTCCACGCC GCACGATTTT TATGATTTCG ACGCCAAGTA TCTGGCAAAC
GATACCGAAT ACACCATTCC GAGCGGGTTG AGTGCCGAGG AAGAATCCGC CATGCAGGCA
ATCGCGCTCA AAGCGTTCGA ACAGATCGGA GGATCGGGTT GGGGGCGGGT CGATTTCATG
CGTGACGAGC ACGGTCAGAA TTGGTTGATC GAAGTCAACA CCGTGCCGGG CATGACCGAT
CACTCGTTGG TGCCGATGGC CGCCCGCGCG GTCGGGATCG AGATCGAGGA ATTGTGTCTG
GGTATTTTGG CGCAGACGCT GCCTGACGAG TCGAAATCAA CAGAGGGCTC CGCCAATGGT
CGGGAACACG ATTGA
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| Protein sequence | MRDPAVFGRV LLLLGGWSSE RVISLKSGET VLGALQRAGI DVTAMDVRRD FLPELLAAHQ
AKPFDRAFII LHGRGGEDGQ IQAVLELLGI PYTGTSMGGS AIGMDKLACK RIWRGEGLPT
PPWAVVATEI EAHRALDSLG LPVMVKPVAE GSSVGVAKVD QPDQLAAAFR EAARYGQVMM
ERYIRGGEYT VSLLGGRALP VIRLSTPHDF YDFDAKYLAN DTEYTIPSGL SAEEESAMQA
IALKAFEQIG GSGWGRVDFM RDEHGQNWLI EVNTVPGMTD HSLVPMAARA VGIEIEELCL
GILAQTLPDE SKSTEGSANG REHD
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