| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0446 |
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| Symbol | |
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| ID | 8533569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 469355 |
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| End bp | 470779 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646382826 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_003262350 |
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| Protein GI | 261855067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCG CGTCCCTTCA GCAAGTTGCA ACTTGGCTGA ATCAATTATC TGTGCAGCAG
CCCGATATCA CCATTCAAGG CGTGAGCACG GATACCCGTA CATTGGTGCC GGGGAATCTG
TTTGTTGCGC TCAAAGGTGA GCGATTCGAC GGGCATGATC ATTTGGCTGA TGCCCGCTTG
GCAGGTGCTG CGGCGGCCAT CGTCTCTCAT TTGAATCCAG ATATCGATCT GCCCCAGATT
GAAGTCGAAG ATACATTGAC CGCGCTGCAA ACCCTTGGGC AATGCTGGCG CGGCCAGGTT
GATCCCTTTG TGATTGCCAT TACCGGCAGC GCGGGCAAAA CCACGGTCAA GCAGCTGCTG
GCGTCCATTT GTGCGCAAGC GGGGCCCACT CTGGCGACGC TTGGAAATTT GAATAACGAC
ATCGGCGTGC CCTTGACGCT GCTTTCGTTG AGTGACATCG ATCAATTCGC CGTGATCGAA
ATGGGTGCGA ACCACCTCGG TGAAATTGCC CGATTAACCG CTCTGGCCAG ACCGGATGTG
GGCTTGATCA CCATGGCCGG CACCGCGCAT GTGGGTGAAT TCGGATCGGT CGATGCGATT
GTTCAGGGCA AAGGCGAGCT CTTCGTTGGT TTGGTGCCCG AGGCGCAAGC GGTAATTAAT
CTCGATTCGT ATGGTGCCGA TCGCTGGTGG GCGATGGGTT CGGCGCAGCG AAACGGTTTT
ACGCTGAACA ACGACCCGCG CGCACGCTGG ACAGGTGAAT ATAACGCCAC TACCGAGCGC
CTGACGATTT TCGAGAACGG GCAGTTGCTG ATCGAGTCGC AACCCCTTCC GTTGCCGGGC
GCGCACAACG CGACCAATCT GCTGGCCGCC GTCGCGGTGG CTCGAACAGC AGGGTTCAGC
AAAGAAATTA TCCTGGCGGG TTTGAACAGC TTTACGCCAC CGGCAGGCCG CATGAGCCTC
GTGGCTTGCT CCGAACAGTT GACTGTCATC AACGACACCT ACAACGCCAA CCCCGAATCC
ATGTGTGCCG CTTTGGATTA TCTCGTCGGC AGGCCGGGCC TGCATCTGGC CGTATTGGGC
GATATGGGTG AGTTGGGTGA TCTCAGCGCC GCGCTGCATG AAGAAGTAAT TGCTTATGCG
CGTGGCTTGG CGATCGATGG TTTGTTCACG CTTGGTGCGG CCATGGATGT TGCCATGAAG
CCGAACGCAG TGTCCTCGAA CGTTTCAATT GAATATTCCG CCAAAGATCA CGCTGATCTG
GCTTTGGCGT TGGTGCGTGC CTTGGACCAA CTGGCGTCAC GATCAGCTAG TGGCACGCCG
ATCACCATTT TATTGAAAGG ATCTCGCTTT ATGCGCATGG AACGAATTCT GAACCAGCTC
CTGCCAACGG ATGGTCCGAG TCCGGCAGAG TCGGAGGCGC ATTGA
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| Protein sequence | MMRASLQQVA TWLNQLSVQQ PDITIQGVST DTRTLVPGNL FVALKGERFD GHDHLADARL
AGAAAAIVSH LNPDIDLPQI EVEDTLTALQ TLGQCWRGQV DPFVIAITGS AGKTTVKQLL
ASICAQAGPT LATLGNLNND IGVPLTLLSL SDIDQFAVIE MGANHLGEIA RLTALARPDV
GLITMAGTAH VGEFGSVDAI VQGKGELFVG LVPEAQAVIN LDSYGADRWW AMGSAQRNGF
TLNNDPRARW TGEYNATTER LTIFENGQLL IESQPLPLPG AHNATNLLAA VAVARTAGFS
KEIILAGLNS FTPPAGRMSL VACSEQLTVI NDTYNANPES MCAALDYLVG RPGLHLAVLG
DMGELGDLSA ALHEEVIAYA RGLAIDGLFT LGAAMDVAMK PNAVSSNVSI EYSAKDHADL
ALALVRALDQ LASRSASGTP ITILLKGSRF MRMERILNQL LPTDGPSPAE SEAH
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