Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0420 |
Symbol | |
ID | 8533542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 440276 |
End bp | 441010 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646382799 |
Product | protein of unknown function DUF558 |
Protein accession | YP_003262324 |
Protein GI | 261855041 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCATAC CTCGAATCTA CCTCGACGCA GCCTTGGCGG AAGGCGCAAC CCTGCCGCTG CCCGCCGAAC GGCTCAACTA CCTCAAGAAT GTTCTGCGCC TGCGCGATGG GCAGGCCCTA CGCGTGTTCG ACGGCCAAAA TCACGAAGCC GATGCAACGC TCAGTCTGGG CAAGCGCGAG GGTTCGCTGG CAATTGGCCG TGTGGCCGCG CACAGCGTCG AATCGCCGTT GCAGACCCAT CTGATTCAAG CGATGGGCAA GGGCGAAAAA ATGGACTGGG TAATCCAAAA AGCGGTCGAG CTGGGCGTGA CCCGCTTCAC TCCGGTGTCG ACCGAGCGAA GCGTTGTCGA ACTCAAGGGC GAGCGTGCCG ATAAGCGCCA TGCCCGATTT ATTGATATTG CCATTGGCGC TTGCGAACAG TCGGGGCGTA ATTTTTTGCC CCGTGTCGAT CCGATCCTAT CGCTTGAAGA GGCCTTAACG CAGACCGACG CGGCGCTCAA ATGGGTGCTG CATCCCAACC CCGGTTCCGG TGCTGCCTTA CCGGCGGTCG CGCCTGACAG TGTTGCACTC TTGATTGGCC CCGAAGGCGG TCTTAGCGAT CACGAAGTCG AGGCGGCCAT TGCGTCGGGT TTTATGCCGC TGACACTCGG GTCGCGCGTC CTGCGCACCG AAACCGCCCC CATCGTTGCC TTAAGTGTGC TGCAAATGCA GTGGGGCGAT TTTTTCGTCG GATGA
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Protein sequence | MRIPRIYLDA ALAEGATLPL PAERLNYLKN VLRLRDGQAL RVFDGQNHEA DATLSLGKRE GSLAIGRVAA HSVESPLQTH LIQAMGKGEK MDWVIQKAVE LGVTRFTPVS TERSVVELKG ERADKRHARF IDIAIGACEQ SGRNFLPRVD PILSLEEALT QTDAALKWVL HPNPGSGAAL PAVAPDSVAL LIGPEGGLSD HEVEAAIASG FMPLTLGSRV LRTETAPIVA LSVLQMQWGD FFVG
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