| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0409 |
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| Symbol | |
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| ID | 8533531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 428269 |
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| End bp | 430257 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646382788 |
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| Product | transketolase |
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| Protein accession | YP_003262313 |
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| Protein GI | 261855030 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.148616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACGC GTAGAGAGCT TGCCAATGCG ATTCGTGCCC TGAGTATGGA CGCAGTACAA
AAAGCGAACT CAGGCCACCC CGGTGCGCCC ATGGGTATGG CTGATATTGC CGAAGTACTG
TGGAACGGCT ACCTGAAGCA CAATCCAAAG AACCCACAAT GGCCAAACCG TGACCGCTTT
GTTCTGTCTA ACGGACACGG TTCCATGCTG ATCTACTCGT TGCTGCACCT CTCTGGCTAC
GAACTGCCGA TGGAAGAACT CAAGAACTTC CGTCAACTGC ACTCGAAAAC GCCTGGCCAC
CCGGAATATG GCTATACACC TGGCGTTGAA ACGACCACCG GGCCGCTAGG TCAGGGCATT
ACCAATGCGG TAGGCTTCGC CATCGCCGAA AAAATGCTGG CAGGCCAATT CAACAAGCCA
GGTCACAACG TCGTTGATCA TTACACCTAC TGCTTCCTCG GCGACGGTTG CATGATGGAA
GGCATTTCTC ATGAGGCCTG CTCACTGGCA GGCACCTTGG GTCTGGGCAA ATTGATCGCA
TTCTATGATG ACAACGGCAT CTCCATCGAT GGTCACGTCG AAGGCTGGTT CACCGATGAC
ACACCGGCTC GCTTTGAAGC CTATGGTTGG CACGTTGTGC GTGATGTGGA CGGCCACGAT
GCCGAAGCCA TCGATGCCGC CATCCGCGAA GCGCGCTCAG TCAATGACAA ACCCACCATG
ATCTGCACAA AGACCGTCAT CGGCTTCGGT GCGCCGAATC TGTGTGGCAC CCACGATTGC
CACGGCGCCG CGCTGGGCGA AGCCGAAGTC AAGGCAACGC GTGACAATCT GGGCTGGCAC
CACGAACCAT TCGTCATCCC TGCTGAAATC TATGCGGGAT GGGATGCGAC CGAAGCGGGT
ATCCGCAACG AGTCGGCTTG GGAAGACGCC ATGAACGCCT ATGCCAAGGC ATACCCTGCC
GAAGCGGCTG AACTCAAGCG TCGTCTGGCT GGCGACCTGC CTGCTGACTT TACTTCAAAG
ATGGATGCAT TCATTGCTGA AGTTGCTGCA AAAGGCGAAA CCATTGCCAC GCGTAAAGCG
TCGCAGAACA GCATTACAGC GATTGCTGCC ATCCTGCCGG AAATTGTTGG TGGCTCTGCT
GACCTCGCGC CGTCCAACCT CACCACCTGG AAAGGTTGCC GCGCCCTCAC GGCTACCGAA
TCCGATGCGA ACTACATCCA CTACGGTGTA CGTGAGTTCG GCATGTCGGC CATCATGAAC
GGCATGGTCC TGCATGGCGG TTTCGTTCCG TTTGCAGCGA CCTTCCTGAT GTTCTCCGAA
TACGCGCGCA ATGCCCTGCG CATGTCCGCG CTGATGAAGA TCGGCTCGAT CTTTGTTTAT
ACCCACGACT CGATCGGTCT GGGTGAAGAC GGCCCGACGC ACCAGCCGGT TGAGCAAATC
GCCACCTTGC GCATGATTCC TCGCATGAAC ACATGGCGTC CTTGCGATGC GGTCGAATCC
GCCGTCGCCT GGAAAGCAGC AATCATGCGT CGTGATTCGC CCAGCACCCT GATTTTCTCT
CGTCAGAACC TGGCACATCA GAACCGCACT CCTGAACAGA TCGCCAACAT CGCCCGCGGC
GGATACATCC TGCGTGATTG CGCCGGTACA CCGGATCTGA TCCTGATCGC CACCGGCTCC
GAAGTTGCCT TGGCAACGGC TGCAGCCGAG AAGCTTGCAG GCAAAAAGGT TCGTGTCGTC
TCCATGCCTT GCACCGAAGT ATTCGATGCT CAAGATCCGG CTTACCGCGA ATCGGTTCTA
CCGGCCGCCG TACGTGCGCG CGTCGCCGTC GAAGCGGGCG TCACCGGATT CTGGGGCAAA
TATGTCGGAC TGGATGGCAA GGTTGTCGGC ATCGACACCT TCGGCGAGTC TGCGCCTGCA
GGCGATCTGT TCAAGCTCTT CGGCTTCACT GTTGACAACG TGGTCGCCAC GGCACAATCC
GTACTGTAA
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| Protein sequence | MSTRRELANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WNGYLKHNPK NPQWPNRDRF
VLSNGHGSML IYSLLHLSGY ELPMEELKNF RQLHSKTPGH PEYGYTPGVE TTTGPLGQGI
TNAVGFAIAE KMLAGQFNKP GHNVVDHYTY CFLGDGCMME GISHEACSLA GTLGLGKLIA
FYDDNGISID GHVEGWFTDD TPARFEAYGW HVVRDVDGHD AEAIDAAIRE ARSVNDKPTM
ICTKTVIGFG APNLCGTHDC HGAALGEAEV KATRDNLGWH HEPFVIPAEI YAGWDATEAG
IRNESAWEDA MNAYAKAYPA EAAELKRRLA GDLPADFTSK MDAFIAEVAA KGETIATRKA
SQNSITAIAA ILPEIVGGSA DLAPSNLTTW KGCRALTATE SDANYIHYGV REFGMSAIMN
GMVLHGGFVP FAATFLMFSE YARNALRMSA LMKIGSIFVY THDSIGLGED GPTHQPVEQI
ATLRMIPRMN TWRPCDAVES AVAWKAAIMR RDSPSTLIFS RQNLAHQNRT PEQIANIARG
GYILRDCAGT PDLILIATGS EVALATAAAE KLAGKKVRVV SMPCTEVFDA QDPAYRESVL
PAAVRARVAV EAGVTGFWGK YVGLDGKVVG IDTFGESAPA GDLFKLFGFT VDNVVATAQS
VL
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