Gene Hneap_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0408 
Symbol 
ID8533530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand- 
Start bp427153 
End bp428151 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content54% 
IMG OID646382787 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003262312 
Protein GI261855029 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.752098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTA AAGTAGGTAT CAACGGGTTC GGCCGTATTG GCCGTATGGT GTTTCGCGCT 
GCTGCGAAAG ACTTTCCTGA AATCGAAGTC GTTGCCATCA ACGACCTGCT GGATGCCGAT 
TACCTGGCAT ACATGCTGAA ATACGATTCC GTACACGGTC GTTTTGATGG CGACGTTTCT 
GTCGACGGCA ACCACCTCGT TGTCAACGGC AAGCGCATCC GCCTGACCGC CGAGCGCGAC 
CCGGCCAACC TCAAGTGGAA CGAAGCAGGC GCGGATATCG TCATCGAATC CACCGGCTTC 
TTCCTGACCA AAGAAACTTG CCAGGCGCAC ATCAACGCCG GTGCCAAGAA AGTCATCCAG 
TCCGCGCCCT CAAAAGATGA CACACCTATG TTCGTTTATG GTGTAAACCA TGACAAATAT 
GCCGGTGAAA ACATCGTTTC AGCCGCCTCT TGCACCACAA ACTGCCTGGC TCCAGTCGCC 
AAAGTGTTGA ACGATGCATT CGGCATCAAG CGCGGTCTGA TGACCACCGT TCACGCGGCC 
ACAGCCACCC AGAAAACTGT TGATGGTCCT TCCGCCAAAG ACTGGCGCGG CGGTCGCGGC 
ATTCTGGAAA ACATCATCCC CTCATCAACG GGCGCCGCGA AGGCAGTAGG CGTGGTTCTG 
CCGGAACTCA ATGGCAAACT GACCGGCATG GCTTTCCGTG TGCCGACTTC TGATGTCTCT 
GTCGTGGACC TGACCGTTGA GCTGAACAAA GAAACCACCT ACGCTGACAT CTGCAAGGCC 
ATGAAATCGG CATCAGAAAG TGGCTCACTC AAAGGCGTTC TTGGGTACAC CGACGACTCA 
GTGGTTTCCA CCGACTTCCG TGGCGTGGCT CAACCATCTG TATTCGACGC CAAGGCCGGT 
ATCCAGTTGG ATCCAACCTT CGTGAAAGTC GTTGCTTGGT ATGACAACGA ATACGGGTAC 
ACCAGTAATC TGATGCGGAT GGTGAAGGTT ATCGGTTAA
 
Protein sequence
MTIKVGINGF GRIGRMVFRA AAKDFPEIEV VAINDLLDAD YLAYMLKYDS VHGRFDGDVS 
VDGNHLVVNG KRIRLTAERD PANLKWNEAG ADIVIESTGF FLTKETCQAH INAGAKKVIQ 
SAPSKDDTPM FVYGVNHDKY AGENIVSAAS CTTNCLAPVA KVLNDAFGIK RGLMTTVHAA 
TATQKTVDGP SAKDWRGGRG ILENIIPSST GAAKAVGVVL PELNGKLTGM AFRVPTSDVS 
VVDLTVELNK ETTYADICKA MKSASESGSL KGVLGYTDDS VVSTDFRGVA QPSVFDAKAG 
IQLDPTFVKV VAWYDNEYGY TSNLMRMVKV IG