| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0403 |
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| Symbol | |
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| ID | 8533525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 419701 |
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| End bp | 421494 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646382782 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_003262307 |
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| Protein GI | 261855024 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCCAC CACCAAACGA GCAACGCCTG ATTCAACGCC GACAACAACC CCAGATTCCC
GAGGCCATGT CGAGCATTGA TTCGCGTCTG GCTGCAATCC TCGTCAACAG GGGCATTGTG
CACCCACGGC AGATCAATCC CGACCTTGAA TTTTTGCTGC CGCCAGCGGA CATGCCTGGA
ATCGACGTAG CGGCCGATAT TCTTGCCGAT GCCGTTCGCG AAAATGCGCG CATCCTGATC
ATCGGTGATT TCGATGCCGA TGGCGCCACT GCCACCGCGC TGTGCGTCAG GGCCTTACGC
GCAATGGGCG CCAAACAGGT GGAATACACC CTGCCCGACC GACAACGCCA TGGTTATGGC
CTCTCGCCCG CCTTGTTAAA GGACTGGATT GCCGAAGCCG ATGCGCCACC GGATATCATT
CTGACCGTGG ATAACGGCAT TGCGGCCTTT GCCGGCGTTG CTGCCGCACT GACTCTGAAC
GCGACCGTCA TCATCACCGA CCACCATCTG CCGGGTGACA CCCTTCCGCC AGCGCATGCG
ATCGTTAATC CCAACCTCAA CGGCTCCGAT TTCGCTTCAA AGGCAATTGC CGGTGTCGGG
GTGGCGTTTT ATGTCATGGC GGCACTCAGG GAACGGTTAT CCGCGCAGGA CTGGTTCGCC
GGCGGCATTG CAAGACCCAA CCTCGCGCGC TGGCTGGATC TGGTCGCCGT GGGCACGGTG
GCCGACGTGG TCTCGCTGGA CGACAATAAT CGCCGTTTGG TCGCCCAGGG TTTGGCGCGC
ATTCAAGCGC AACAGTGCGT ACCGGGCATA TCGGCCTTGT TTGCGGTGGC TGGTAAGGAT
CCGCGTTATG CCAGCAGTAC GGATCTCGGT TTTGTCGTCG GGCCAAGACT GAATGCGGCC
GGGCGATTGG AAGACATGCG GATCGGCGTG GATTGCCTAT TGGCGGACGA TCCCATCTCC
GCTCGTCAAT ACGCCATGAC ACTCAACGAG ATCAATCACG AGCGACGCGC CCTCGAACAG
GAAATGTTAT TCAGCCTGAA AAAACAGGGC AAAAGCTCGG GGCTTAACGA GCTTGATCTC
GATCGCCCGA TTGATCCTGC CGACTGGGTG ATTTTTGACG ACAGCTTCCA TCAGGGCGTG
ATCGGTATTG TCGCCGGTCG CCTCAAAGAA CGCTGGCAAC GGCCCGTGTT CGTGTTTGCA
CCAGAGAATA ATGACGCGCC ACGAGCAAAA CTCAAGGCAT CCGGACGCTC AATCCCCGGC
GTCCATCTGC GCGATGTGCT CGTGTCGATG GCCACGACTG CGCCCGATCT GATGCATGCA
TTCGGCGGAC ATGCCATGGC CGCTGGACTG AGCTTGTCAT TCGATCAGCT CGATACATTT
CGCCGCCTGT TCGCTCGCGA GATGGCAAAG CACCGGTTGC ACTTTCCCGA TCAGGCCATC
GTGCACACCG ATGGCCCATT AAGCGCAAAC GAACTCACGC TGGACTTTGC GCAACAACTG
CAAACCTGCA CCCCCTGGGG AACCGATTGC CCGGAACCGA TTTTCGACAA CCGGTTTGAA
GTGCTGGAAC GCACACCACT CAAGGAAGGT CGGCACTGGC GCCTGCGTTT ACGACTGCTC
AAAACCGAAC CAGCCACACC CACCATCGGC GCCGATCTAA CGGCCGTCTG GTTCGGCATC
GGCGACCATA TTCCCGCCGG AAAATACTGG CATCTGGCCT ATCGGATCGA CATCAACCGA
TTCCGGGGGC AGCAAACATT GCAACTGATG ATCGTCTCGG GCGTAGCCGC CTGA
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| Protein sequence | MTPPPNEQRL IQRRQQPQIP EAMSSIDSRL AAILVNRGIV HPRQINPDLE FLLPPADMPG
IDVAADILAD AVRENARILI IGDFDADGAT ATALCVRALR AMGAKQVEYT LPDRQRHGYG
LSPALLKDWI AEADAPPDII LTVDNGIAAF AGVAAALTLN ATVIITDHHL PGDTLPPAHA
IVNPNLNGSD FASKAIAGVG VAFYVMAALR ERLSAQDWFA GGIARPNLAR WLDLVAVGTV
ADVVSLDDNN RRLVAQGLAR IQAQQCVPGI SALFAVAGKD PRYASSTDLG FVVGPRLNAA
GRLEDMRIGV DCLLADDPIS ARQYAMTLNE INHERRALEQ EMLFSLKKQG KSSGLNELDL
DRPIDPADWV IFDDSFHQGV IGIVAGRLKE RWQRPVFVFA PENNDAPRAK LKASGRSIPG
VHLRDVLVSM ATTAPDLMHA FGGHAMAAGL SLSFDQLDTF RRLFAREMAK HRLHFPDQAI
VHTDGPLSAN ELTLDFAQQL QTCTPWGTDC PEPIFDNRFE VLERTPLKEG RHWRLRLRLL
KTEPATPTIG ADLTAVWFGI GDHIPAGKYW HLAYRIDINR FRGQQTLQLM IVSGVAA
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