| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0370 |
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| Symbol | |
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| ID | 8533491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 378823 |
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| End bp | 386088 |
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| Gene Length | 7266 bp |
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| Protein Length | 2421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646382752 |
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| Product | filamentous hemagglutinin family outer membrane protein |
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| Protein accession | YP_003262278 |
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| Protein GI | 261854995 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3210] Large exoproteins involved in heme utilization or adhesion |
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| TIGRFAM ID | [TIGR01731] adhesin HecA family 20-residue repeat (two copies)
[TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG AACAGAAATG CAACTCAATC GCTCGCACCG CCCAACAACG CCAGAGTGTC
CCGGCAGTGG CGCCCATTGG CTACAGAGTG CTGGTCTTCC TGCTAAGTGC AATCATACCG
CCCAGTGCCA ACGCATCAGG GATTGCAGCA GATCATCAAG CGCCTGCCTA CCAGCAGCCC
ACCATTCAGG TCACTGCGAA CGGCACACCG GAAGCCAACA TCCAAACACC CGGTGTGGAT
GGCGTTTCCC ATAACGTATA CAAACAGTTC GACGTGGGAT CAAAAGGGGT CATCCTCAAT
AACGCCCGTA CCAATGCCCA AACACAACTC GGTGGCTGGA TTCAGGGTAA CCCGAATCTA
GCGAATGGTT CGGCGCGGGT CATTCTCAAT GAGGTCAATA GCAGTCAGCC CAGTCAATTG
AATGGCTACG TCGAAATCGG TGGCCAACGG GCCGAACTCG TCATTGCCAA CCCTTCGGGT
ATCAATGTTG ATGGCGGTGG GTTCATCAAT GCCAGTCGCG CCACACTGAC CACCGGCAAA
CCCGTATTCC AGAATGGCAC TCTGGCCGGT TATCAGGTCT CCAACGGTAG CATCAACATC
AATGGCGCAG GTTTGGACGC CAGTTCGACC GATTACACCG ACATCCTGGC TCGAGCCATC
AATGTCAATG CTGGCATCTG GGCAAATCAG CTCAAACTGG TCACCGGCAG CAACGACATC
AGTCCAGACG GGACTCAGAT CACGCCCACG TCTGGTGATG CAAATAAACC CGGTTTCGGC
ATCGACGTTG CTCAACTGGG AGGCATGTAC GCGGGCAAAA TCACCCTGAT CGGCACTGAA
GCCGGCGTGG GTGTCCGCAA CGCCGGACAA ATCGGCGCCA GCGATAACCT GGTTCTAAAT
GCCAATGGCG AACTGACGAA CAGCGGGCAG ATCACCAGTC AGGGCACCAC CACCGCCCAG
ACCAACGTCA TCGACAACAG CGGCACGATT TACGCTCAGG ACAATGCGCA ATTGAACGCT
AATGGTGACA TCACCAACAG TGGCCGCATC CTGGCTCAAG GAAACTTGGG ACTCGATGCC
GCCACCGACG TGGTCAACCT CGACGGCGCC ATCCTCGGCG CCGGCGTCCA GCCCGACGGC
AGTCTGGGCG GCGCCCGAAA CCTCACCATC GCTTCTGGAC AGAATGCGCG CCTTCAGGGC
AAGAACCTCG CCTCAGGCAA CCTGACGGCA AAAGGAAACA CTGTCGACCT GAGCCATAGC
CAGACACAAG CCGACAGCAT CACTCTGACG GCAACTCACG GTGATATTGA TGCATCGAGC
GCCACTATCA CTGCGCAACA CCAACTCCAA GCCAACGCCA GCGGTTCGTT CATCAACGAT
CAAGCGCAAA CCGCCGCAGG CACGCTCCAA CTGAAAGCCG CGAATCTCAG CAATCTCGAT
GGCCTGATTC TGCTGGGCGA TTCGTCCGGT GCCAGTGATA TAACCCTGAG CAACTTGTTC
GACAACCGCG GTGGCTTGCT GCACACAACT GGGGAGATGC AGATCACTGC AAACCAAGTG
GATAACCGTA ACACGACCCA GTCTGCACAA GGCATTCAGG GTAACGACGT CACCATCACC
GCTGATCGCA TCAATAATGG TTCCGGGCAC ATCCTGGCTA ACCAGAACAT CCAGTTGAAC
AGCGCAGGCC AGATCGACAA CAGCCAAGGT CTCGTCTCCG CCGGCGGCAA TCTGAGCGCT
CAGGACGGCC AGGCTACGCG GTCCCTCGCC ATTACCAACA CGCAAGGTAC CTTCGTTGCC
GGTCAGAACC TTGCTGTGAC CAGCGCTACC TTGAGTGGTG ACGGCCAACT GTATGCGCAA
CAGGACATCC ACCTCCTGTT GGACGGTGGC TTCGACAATA GTGGCACCCT CATCGCTAAC
CACGACACCG ATCTTAATAT CGGTGGCATC CTTACCAACA GCGGCACGCT GCAGGCCGGC
AACACCCTTA CCGCTCACGC CGGCACTATC GATAACCAAG CAAGTGGGCA AATCAGCGCA
GCAGAAGACC GTATCAACGC CACGGGCAAA CTCACCAACC GTGGTCTGAT CGATGGCGGA
ACGACTCGTC TACAGGCGAA CACCATCGAC AACCTCGGTA CCGGCAGGAT CTACGGCGAC
CACATCGCCA TTGGGGCCAA CGACCTGACC AATGAAAATG AAAACGGTAC TGCTGGTACC
ATCGCTGCGC GCAACCGGCT CGACATCGGG GTGCAGACAC TCGAAAACAA GGAACATGCC
CTGATTTACA GCGCCGGTGA CATGAGCATC GGCGGCGCAC TGGATGCCAA CGATCAAGCT
ACCGGCCAGG CGGTGCACCT CACCAACAGC AGTGCGACCA TTGACGCCGA TGGCCAGATT
CAGCTCAGCG CGCAAACCAT CGACAATTTG AATGCGCACC TTGTCACCAG TCAGGTCGAT
GACGCAACCG TTACCCACGA GTATGTTCAA CCACGCGGGC AATCTCAGCT TTTCGACATC
AGCGCATGCT CAGGTATTGG CGGGGGGCAA GATAAGAACA GCTGCAATGG CTATCCTGGC
ACCTTCGAGG ACTATACGCT CTTCATTGTC CACAGCACGC CTTCGCACAC TATTGTGGTG
TCATCTGACC CCGGGAAAAT CCAGGCCGGT GGCGACATCG TCATCAATGG CGCGCTCAAC
AATCGTGACA GCGCTGTTAT TGCAGGCGGT GACCTGGTGG CTTCCCAACC GGTCAGCAAC
ACAGCAACCA AAGGGCAAGA CATCACCCGT TCCACGGGGA CAGCCGAGCT AACCACCGTG
GAGAGTTGCG GTCTGTTCGG CAGTGACCAC TGCCGGGAAT GGCATGGTCA ATCCGCCTAC
AACCCCGCCC CGGTCTACGG TACGCCTTAC GATCTCCCCA CGCTGACCTA TCAAACCCAC
ACATTGATAG GCGGCACCGC GCCAACTATC GGTAACCGCT CGGCGACCGG TACGAGTCAG
CCCGTCAGCC AGCCGATCAA TACCTCTGGC GGTTACGCCT GGACTCAGCC CAATATCACG
CTGCGCAGCA GCAGTCTGTT CCAGGTACAC GACGACAATG GCAACCATCC GCTGATTGAG
ACCGATCCAC GCTTTGCCGA TTATCGGCAA TGGCTCAGCT CTGACTACAT GATCAGCGCC
TTGTCATTAC AGCCGGACAG CCTGCTCAAG CGACTCGGCG ACGGTTACTA CGAACAGAAG
TTGGTGCAAG ATCAGGTTGC AGAACTCACC GGTCGCCGAT TCCTCACCGG CTACAGCAGT
GATGAAGCCC AATTCCAGGC CCTGATGAAT GCGGGTGTAA CCTATGCTAA GCAATGGCAC
CTCATTCCCG GCGTCGCCCT GACCGCCGCA CAGGTAGCAC AACTTTCCAG CGACATGGTC
TGGCTGGTCG CCAAGGACGT GCAACTGCCC AACGGTAAAA CCGAACGCGT TCTGGTGCCA
CAGGTCTACG CGGCCTCCAA CCCGAACGAC CCCGGTAGTA ACGGCAGCCT CATCAGCGCC
AACCGCATTC AAACCCTGGG CCAAGGCACA TGGACCAACA GCGGCACCAT CGCCGGTCGC
CAACTCGTGG CTGTGGGTGC TGATGACATC AATAACCTCG GTGGCAGGAT CCTCGGCCAA
TCCGTATCGC TGTCTGCCCG CAATGACATC AATAACATTG GCGGCAGTAT TGTCGCGGGC
GATGCCCTCA GTTTGAATGC CGGACGCGAC ATCAATATCG TTTCCACTCA CCAACACGTC
AGCAATACGG TGGGCGCCAG CCAGTTCAGC CGCGATAGCA TTTTGCAAAC TGCCCAACTC
AAGGTTCGCA ACACCGACGG CATGTTACTC GCCTCGGCCG GACGCGACTT GGTGCTGACC
GCCGCCAACG TTGATAACGC CGGTACCGGT ACAACTGGAT CAGAAGGCCC TGCTACTCAA
CTGCAAGCGG GCCACGATAT TCGGCTCACC ACCCTGACTA CCGGTCAGGA AAACCGCGTC
GTTTGGGATG CCGACAATCA CGATACCCAT GGCAACCAAC AAGACGTCGG CACCCGCATC
CACAGTGCGG GCGATCTCGC CATGATCGCG GGGAACGACA TTCAGGCCAA GGCCGCCGGA
ATCCATAGCG ATAACGGCAC CTTGAACCTG CAAGCCGGTC ACGACATTCA ACTGACAGAT
GGCCAGAGCA GCACCCTCTG GGATGAAGCG CACAAGCTCA GCAGCAGTGG CCTATTCTCC
AGCAGCACGA GCATCTCACG TGACAATGTC AGCGACAGCC GCAGCGTCGC CACCAAACTG
AGCGGCCAGA GCGTGCAGCT CTCCGCCAAC CACGACATCG CCCTTCAAGG CAGCCAAATC
GATGCAAACG GTAACATCGC CCTGCTCGCA GGTGACAACA TCTCCCTGTT GGCTGGTCGT
AATCAGCACA GCGAAAGCCA CTATCGCGAA GAACGCAAAT CCGGCTTTAC CACCAAGGGT
TATGGCAAAT CCCACACAAT CGATACCGTG GACATGGCCT CCCTCCTAAA CGATGGCAGT
AGCCTGCACA GCACTCAAGG CAACATCACA CTAGCAGCGA ATCTGGCTGA ACAAAACCAG
GCCGATCAAG GTGCCGTGCT GATCGAAGGC AGCCAGGTCC ACGCCGACCA CGGACGGGTG
GATGTCAGCG GCAAGCACGT TATTCTCTCC ACCAGCGAAG ACCAACAGCA ATACAGCCAC
AGCCATCAAA GCACCCACAG TAACTGGGCT TTTATCACCG GCCTGCCTGA TGGCATGCGC
GATGGACTCG ACACCCAGCA ACAAACCATC ACCGTCAACG GCAGCACTCT GCAGGGGCAG
AACGGTGTGG GTGTACAGGC CACCGGCCTG GTGGACATGA CCGCCGCCCA CCTCAAGGCC
AGCCAGGGCG ACATCGACAT CAGCGGTGCT CAGGTCGCCA TTCGCAGCGG CACCAATCAA
CAAGCCAGCA GCAGCCGTGA AACACACAAG AAATCCGGCA TCAGTTGGCG TGATCTGACC
GGCCTGTTCA CACCCGGCAA GGGCGTGGGC TATGACGCCA CCCTCGACAA GAAAAGCAGT
AAAACCACCG TGGCCCATGC CACGCTGGAA GGTCAAAACA TCCACATCCA GGCCAACCAA
GGCGACCTCA CCCTCGCAGC CGTTCAGGCC AAGGCCACCG GCACTTCTGA ACCATCGGAC
GGATCGGACG GGCCGGTTCA TTCGCCTGGG CAAATAAGCC TCAAGGCCGC AGGCAATATC
AATCTCGCCA GCGTCAGTAC CGAAAGCTAC CAGCGGACCG ATGAGAAGCA TAAAGATAAA
GCCTGGCAGG AAACCCACGG TGAAGGCAAT TACGATCAGC AAACCCACTA CAACCAACTA
ACCGCCGGAC AGCTCGATCT TCAGGCCGGT GGCAGCATCA CCGCCGACAT GAGCGTGCGT
GACAGCGCCG CCATGCTGGC CCAGTCACCC GACATGGCCT GGCTGCGCCA GTTGCAACAG
AATCCGAAAC TGGTCGGCAA GGTCGATTGG CAACAGATCG AAGAAGCCCA TCAACATTGG
GACTATAAAC ACCAGGGCCT GACCCCGGCG GCATCCGCCG TCGTGGCCCT GGTTGTTGCG
TACTTCACGA TGGGTGCCGG TTCGGCCATC GTCAATACGG CTGCTGGATC CACTACGGCT
GCAGCCAGTG GCGCCGGTGC CGTCGCGGCA GGCATGACCC AGGCTGCGGT CAGCACCATG
GCCAGCCAAG CGGCCGTCAG CTTCATCAAT AACGGTGGTG ACCTCAGCAA GACCCTGAAC
GATCTGGGCA GCAGCCAGAG CATGCGCCAA CTGGCCACAG CCGTTGTCAC CGCCGGGGTG
CTTAGCAGTA TTGGTCAAGT CACCTTCGGC GAAGGCAAGA ATGCCTTCCG GCTGAACGAT
GTCAAGGTAA GCGATGGCCT GGTACCGAAC ATCGGCAAAA ACCTGATCGA CGGCGTTGCC
CGAGCCACCG TCAACAGCGC CATCACCGGC ACCGACCTTC AAACCAATAT CCGCACCAAT
GTGGTGGCTG GCATCCTGGG TGCCGCCGAA CAACAAGGTG CTAATTGGAT CGGCAACCAG
ACCCTGCTGG GCGGGGACTT CAACACCAAC GGCAACGTCA ACGAATTCGC CCATGAATTC
GCCCATGCCA TCGTCGGTTG TGCCGCAGGA GTGGCCGGTG CCAGTGCATC GGGCAGTGGT
ACCAGTACCG GTCAAGGTTG TAGTGCTGGA GCCTTGGGTG CCGTGGTGGG TGAACTATCC
GCCCAATTCT ATGGCGGTAC CGATCCGAAC CAGACCATCG CCTTCGCCCA GATGATGGGC
GGCATCGCCG CTGCTGCGGC GGGGCTTGGT TCCGAAGGCG TTGCCATCGC CGCCAATACC
GGTGCCAATG CGGCGCAGAA CAACTACATG GCGCATTACG ACACGTATGA AGCGGATCTG
AAGGACTGTC AGCAGAATCC GGGCGGTGTG AACTGCGGTG CCATCTTAAG TTTGACCGAA
GGTACGAACG CTCGTTATCT CGGTATGACC CAAGGCGGTT ATCGGGTTGC GGCCAACATG
GGTAAAGACG GCGCTGCAAG CTATACCGTC GTTAGCCCCA ATGGCGAAAT GATGGTGATG
CAGCCAACCG AATGGGCCTA CTTCTCCCAG ATGACATCCG GACAGCAGGC GACGATATTT
GCCGGATCAC AATGGCAACT GGACCTGACT TCGGCAACCG AGTATGGTTT GGCAGGCGAC
ACGACAGCCG CCATGGCAAA CTATGCGCAC ATGCTGACCC AACCGGATTA CTGGATTGGC
ATGGGGGCCG CGTTGATACC TACTAGCGTA CTGGGACGAA CTGCCGGCAT GACCAACCAG
CTAGCAACCG GAACGAACAA GGCAATGTTC TGGTCCGGCC TTGGCCGGGG TGGCGACAAA
ATTGCCGCAA GAGCTGCCGC TCAACAAGGA AAAATGACTC TTGAATCTAC GCTTGCCGCT
CGCGGTATCA AATTACCAAA ATGGGACCCA GACAATCCGG AAGTAGTATC AGCCTGGAGA
CAGGCTTCCC ACGATTTTGC GGCGGGCGCA AGGGGAAATG TGCGAGTGTT ACAAGGTGAC
GTTTTACGGG GGAACTCAGT CTGGGCAGAA GTTGAATTCC CAGCACTGAA AGCAAATCCC
ACTGTGAAAT CTATTACCTC AATAGATGCC GCAACGGGTA AAGAGGTATT GCTGTGGTCA
AGATAG
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| Protein sequence | MKIEQKCNSI ARTAQQRQSV PAVAPIGYRV LVFLLSAIIP PSANASGIAA DHQAPAYQQP
TIQVTANGTP EANIQTPGVD GVSHNVYKQF DVGSKGVILN NARTNAQTQL GGWIQGNPNL
ANGSARVILN EVNSSQPSQL NGYVEIGGQR AELVIANPSG INVDGGGFIN ASRATLTTGK
PVFQNGTLAG YQVSNGSINI NGAGLDASST DYTDILARAI NVNAGIWANQ LKLVTGSNDI
SPDGTQITPT SGDANKPGFG IDVAQLGGMY AGKITLIGTE AGVGVRNAGQ IGASDNLVLN
ANGELTNSGQ ITSQGTTTAQ TNVIDNSGTI YAQDNAQLNA NGDITNSGRI LAQGNLGLDA
ATDVVNLDGA ILGAGVQPDG SLGGARNLTI ASGQNARLQG KNLASGNLTA KGNTVDLSHS
QTQADSITLT ATHGDIDASS ATITAQHQLQ ANASGSFIND QAQTAAGTLQ LKAANLSNLD
GLILLGDSSG ASDITLSNLF DNRGGLLHTT GEMQITANQV DNRNTTQSAQ GIQGNDVTIT
ADRINNGSGH ILANQNIQLN SAGQIDNSQG LVSAGGNLSA QDGQATRSLA ITNTQGTFVA
GQNLAVTSAT LSGDGQLYAQ QDIHLLLDGG FDNSGTLIAN HDTDLNIGGI LTNSGTLQAG
NTLTAHAGTI DNQASGQISA AEDRINATGK LTNRGLIDGG TTRLQANTID NLGTGRIYGD
HIAIGANDLT NENENGTAGT IAARNRLDIG VQTLENKEHA LIYSAGDMSI GGALDANDQA
TGQAVHLTNS SATIDADGQI QLSAQTIDNL NAHLVTSQVD DATVTHEYVQ PRGQSQLFDI
SACSGIGGGQ DKNSCNGYPG TFEDYTLFIV HSTPSHTIVV SSDPGKIQAG GDIVINGALN
NRDSAVIAGG DLVASQPVSN TATKGQDITR STGTAELTTV ESCGLFGSDH CREWHGQSAY
NPAPVYGTPY DLPTLTYQTH TLIGGTAPTI GNRSATGTSQ PVSQPINTSG GYAWTQPNIT
LRSSSLFQVH DDNGNHPLIE TDPRFADYRQ WLSSDYMISA LSLQPDSLLK RLGDGYYEQK
LVQDQVAELT GRRFLTGYSS DEAQFQALMN AGVTYAKQWH LIPGVALTAA QVAQLSSDMV
WLVAKDVQLP NGKTERVLVP QVYAASNPND PGSNGSLISA NRIQTLGQGT WTNSGTIAGR
QLVAVGADDI NNLGGRILGQ SVSLSARNDI NNIGGSIVAG DALSLNAGRD INIVSTHQHV
SNTVGASQFS RDSILQTAQL KVRNTDGMLL ASAGRDLVLT AANVDNAGTG TTGSEGPATQ
LQAGHDIRLT TLTTGQENRV VWDADNHDTH GNQQDVGTRI HSAGDLAMIA GNDIQAKAAG
IHSDNGTLNL QAGHDIQLTD GQSSTLWDEA HKLSSSGLFS SSTSISRDNV SDSRSVATKL
SGQSVQLSAN HDIALQGSQI DANGNIALLA GDNISLLAGR NQHSESHYRE ERKSGFTTKG
YGKSHTIDTV DMASLLNDGS SLHSTQGNIT LAANLAEQNQ ADQGAVLIEG SQVHADHGRV
DVSGKHVILS TSEDQQQYSH SHQSTHSNWA FITGLPDGMR DGLDTQQQTI TVNGSTLQGQ
NGVGVQATGL VDMTAAHLKA SQGDIDISGA QVAIRSGTNQ QASSSRETHK KSGISWRDLT
GLFTPGKGVG YDATLDKKSS KTTVAHATLE GQNIHIQANQ GDLTLAAVQA KATGTSEPSD
GSDGPVHSPG QISLKAAGNI NLASVSTESY QRTDEKHKDK AWQETHGEGN YDQQTHYNQL
TAGQLDLQAG GSITADMSVR DSAAMLAQSP DMAWLRQLQQ NPKLVGKVDW QQIEEAHQHW
DYKHQGLTPA ASAVVALVVA YFTMGAGSAI VNTAAGSTTA AASGAGAVAA GMTQAAVSTM
ASQAAVSFIN NGGDLSKTLN DLGSSQSMRQ LATAVVTAGV LSSIGQVTFG EGKNAFRLND
VKVSDGLVPN IGKNLIDGVA RATVNSAITG TDLQTNIRTN VVAGILGAAE QQGANWIGNQ
TLLGGDFNTN GNVNEFAHEF AHAIVGCAAG VAGASASGSG TSTGQGCSAG ALGAVVGELS
AQFYGGTDPN QTIAFAQMMG GIAAAAAGLG SEGVAIAANT GANAAQNNYM AHYDTYEADL
KDCQQNPGGV NCGAILSLTE GTNARYLGMT QGGYRVAANM GKDGAASYTV VSPNGEMMVM
QPTEWAYFSQ MTSGQQATIF AGSQWQLDLT SATEYGLAGD TTAAMANYAH MLTQPDYWIG
MGAALIPTSV LGRTAGMTNQ LATGTNKAMF WSGLGRGGDK IAARAAAQQG KMTLESTLAA
RGIKLPKWDP DNPEVVSAWR QASHDFAAGA RGNVRVLQGD VLRGNSVWAE VEFPALKANP
TVKSITSIDA ATGKEVLLWS R
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