Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0352 |
Symbol | |
ID | 8533472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 356195 |
End bp | 357001 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646382735 |
Product | RNA methyltransferase, TrmH family, group 3 |
Protein accession | YP_003262262 |
Protein GI | 261854979 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.426039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAC GCAAAAGCGC ATCTTCCACG CAGTGGCTTA GTGGTTTTCA TGCTGTCGAA GCGGCCCTTC AACACGATCC GGAACGTGTG TTGTCGGTTA TTTTCGAACA AGGGCGACAG GATAAGCGGG TGCAACAACT GCGTGTGCTC GCCGAGTCGC GTGGCGTATC CATCGAGGAG GCCCCCGAGA AGGTTTTCGC CGACCGCGTG CGTGCCGATC GAGAGCTGGC GCGCCACCAA GGCGTACTGG CACGCTATCA GCCCAAGCCG GCCGGCAACG AGCATGACTT GTTCGCGTTA CTCGACAATC TGGACGAGCC CGCATTCTTG CTGATTCTCG ATGGCGTGAC TGATCCGCAC AACCTGGGTG CTTGCCTGCG CAGCGCCGAG GCTGCGGGCG TTCATGCCGT TATTTCCCCC AAGGATCGCG CGGTCGGTTT GACGCCAACC GCGCGCAAGG CTGCCTCCGG CGCCGCTGAG CGCTTGCCAT TCATTCAGGT AACGAACCTT GCGCGCACGC TTGCCGATCT CAAATCTCGC CAGATCTGGA TTGTCGGTGC GGCAGGAGGT GGCATGGTCA GCTTGTATGA GTCGGATTTC GCCGCCGAGT CGGTCGCCCT TGTGATGGGT AGCGAAGGGG AAGGGTTGCG TCGTCTGACA CAGGAAGGTT GCGATCAGTT GATCTTCATT CCTATGCGCC CTCCTGTCGA AAGTTTGAAT GTTTCAGTGG CTGCGGCCGT TTGTCTGTTC GAGTTTCGCC GAGTGCGAGA CCAAGTCATA AATCAGGCGC GAGCGCTATC CCAATAA
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Protein sequence | MAERKSASST QWLSGFHAVE AALQHDPERV LSVIFEQGRQ DKRVQQLRVL AESRGVSIEE APEKVFADRV RADRELARHQ GVLARYQPKP AGNEHDLFAL LDNLDEPAFL LILDGVTDPH NLGACLRSAE AAGVHAVISP KDRAVGLTPT ARKAASGAAE RLPFIQVTNL ARTLADLKSR QIWIVGAAGG GMVSLYESDF AAESVALVMG SEGEGLRRLT QEGCDQLIFI PMRPPVESLN VSVAAAVCLF EFRRVRDQVI NQARALSQ
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