| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0347 |
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| Symbol | |
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| ID | 8533467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 349342 |
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| End bp | 350337 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646382730 |
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| Product | DNA-directed RNA polymerase, alpha subunit |
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| Protein accession | YP_003262257 |
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| Protein GI | 261854974 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000103496 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTAG GTTCTACCGA ACTGCTTAAG CCACGACTGG TCGATGTTCA GGTTTTGGAC
GCGACCCGGG CCCGTGTCGT GCTGGAGCCG CTTGAGCGTG GCTTCGGTTA CACACTTGGT
AATGCGCTTC GCCGTATTCT TCTTTCTTCC ATCCCAGGCG TTGCCGTAAC GGAAGCGGAA
ATTGAAGGTG TTGTTCATGA GTACACTACC ATTGAGGGTG TGCACGAGGA CGTGCTTGAA
ATTCTGCTCA ACCTGAAAGG TCTTTCTGTC ATGCTTCATG GTCGCGACGA GGCCATGCTG
AGCATCAAGA AAACTGGTGC TGGCGCCATC ACGGCTGCCG ATATCAAGGC CGATCACGCT
GTTGAAATCA TCAATCCTGA GCATCACATT GCTACATTGA ATGATCAGGG TAGCTTGGTT
ATGACCTTCA AGGTCACACG TGGTAAAGGA TATGTTCCTG CCAGTGCGCG TCGTGAAGAG
GCGGGTGGTC AAATTGGCCG ACTGCTGGTT GACGCCTCAT TTTCTCCACT GCGTCGCGTT
TCTTATTCTG TCGAGCGCGC TCGTGTTGAA CAGCGTACCG ATCTTGACTC GCTTGTTCTT
GATATCGAGA CCAACGGTTC TATTTCTGCC GAAGATGCCA TTCGTCAAGC CGCTGGCATT
TTGGTTGATC AGCTATCGGT CTTTGTTGAC CTCAAGGCTG AAAAAGTAGA GCCAGTGGTT
GAGCAAGCGC CTGCAGTTGA TCCGGTTCTG CTGCGTCCAG TCGATGATCT TGAGTTGACC
GTTCGTTCGG CTAACTGCCT GAAGGCAGAA AATATTTATT ACATCGGTGA TCTCATTCAG
CGTACGGAAA TCGAGTTGCT AAAAACTCCG AATCTGGGTA AAAAATCGCT GACTGAAATC
AAGGACGTTC TGGCCAAGCA GGGTTTGTCT CTGGGTCAAC GTCTCGAAAA CTGGCCACCT
GCAGAGCTTT TGAATCTCGC TGAGTCGAAG ATTTAA
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| Protein sequence | MQLGSTELLK PRLVDVQVLD ATRARVVLEP LERGFGYTLG NALRRILLSS IPGVAVTEAE
IEGVVHEYTT IEGVHEDVLE ILLNLKGLSV MLHGRDEAML SIKKTGAGAI TAADIKADHA
VEIINPEHHI ATLNDQGSLV MTFKVTRGKG YVPASARREE AGGQIGRLLV DASFSPLRRV
SYSVERARVE QRTDLDSLVL DIETNGSISA EDAIRQAAGI LVDQLSVFVD LKAEKVEPVV
EQAPAVDPVL LRPVDDLELT VRSANCLKAE NIYYIGDLIQ RTEIELLKTP NLGKKSLTEI
KDVLAKQGLS LGQRLENWPP AELLNLAESK I
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