Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0343 |
Symbol | |
ID | 8533463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 346489 |
End bp | 347823 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646382726 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_003262253 |
Protein GI | 261854970 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000192463 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGCTAT CAAATGCCGG TGTAGCGAGT TTGGCGGGAG CAGGTCGATT GACTGAGCTC CGTCAGCGCA TTTTCTTTGT GATTATGGTG CTGGTTGTCT ACCGAATCGG GACCTTCATT CCGTTGCCAG GAATTGATGT CGATGTGATG CGTACTCTGT TTACGCAGCA CTCTGGCGGC ATCCTTGGCA TGATGAATAT GTTCTCCGGT GGCGCGCTGT CGCGGATGTC TCTATTTGCC CTGGGTGTTA TGCCCTATAT TTCTGCTTCG ATTATTGTAC AACTTCTTTC TTCGGTTCTC CCTTCGCTCG AGCGGATCAA GAAAGAGGGT GAGGCGGGCC GTAGAAAGAT CACGCAGTAC ACTCGTTACG GGACACTTGG TCTTGGCTTG GTTCAGGCGT TGGGTGTTTC CATCGCCTTG CAGGGTCAGT CCGTTGGTGG GCAAAGTCTG GTATACACAC CCGGATTCGG TTTCTTATTC GTCGCTACGA TGACACTCCT AACCGGTACC ATGCTCCTCG TATGGCTCGG TGAGCAGATT ACAGAGCGTG GTGTTGGGAA CGGTATTTCC TTGATCATCT TCGCCGGTAT CGTGGCAGGC TTGCCTACCG CAATTGGTGG TACCGCTGAG TTGGTCCGCA CAGGTGAACT CGGTGTAATA ACCTTGCTAA TTCTTGCTGT GCTGATTGTA GCCGTAACTG CCTTTGTTGT GTTTGTTGAG CGTGGTCAGC GTCGTATCAC GGTTAACTAT GCACGCCGTC AGCAAGGGCG TGGTATGGCG GGCCAGCAGT CTTCGCATCT GCCTTTGAAG TTGAATATGG CTGGTGTAAT CCCGCCTATT TTTGCTTCAA GTATCATCCT GTTCCCAGCA ACGCTGGGTA ACTGGTTGGG GCAGCAAGAG AACATGGCCT GGTTGCGGAG TGTCTCTACT GCTCTGTCTC CTGGTCAGCC GCTGTATGTG GGTCTGTACG CAACTGCGAT TATTTTCTTC TGCTTCTTCT ATACGGCATT GGTTTTTAAT TCGCGCGAAA CTGCGGACAA CTTAAAGCGC TCAGGTGCAT TTGTCCCAGG TATTCGTCCG GGCGAACATA CTGCTCGCTA TATTGATAAG GTTCTTACAC GTCTGACATT CTGGGGTGCT TTGTACATCA CTGCGGTTTG TCTGCTGCCA GAGTTCCTGA TTTTGTATTG GAATGTGCCC TTCTACTTCG GCGGCACTTC ACTGTTGATT ATAGTGGTTG TTCTGATGGA CTTTATGGCT CAGGTCCAGT CTCATCTGGT TTCCCACCAG TACGATAGCT TGGTTCGTAA AGCACACTTC AAGTCTGGAT TATAA
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Protein sequence | MALSNAGVAS LAGAGRLTEL RQRIFFVIMV LVVYRIGTFI PLPGIDVDVM RTLFTQHSGG ILGMMNMFSG GALSRMSLFA LGVMPYISAS IIVQLLSSVL PSLERIKKEG EAGRRKITQY TRYGTLGLGL VQALGVSIAL QGQSVGGQSL VYTPGFGFLF VATMTLLTGT MLLVWLGEQI TERGVGNGIS LIIFAGIVAG LPTAIGGTAE LVRTGELGVI TLLILAVLIV AVTAFVVFVE RGQRRITVNY ARRQQGRGMA GQQSSHLPLK LNMAGVIPPI FASSIILFPA TLGNWLGQQE NMAWLRSVST ALSPGQPLYV GLYATAIIFF CFFYTALVFN SRETADNLKR SGAFVPGIRP GEHTARYIDK VLTRLTFWGA LYITAVCLLP EFLILYWNVP FYFGGTSLLI IVVVLMDFMA QVQSHLVSHQ YDSLVRKAHF KSGL
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