Gene Hneap_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0340 
Symbol 
ID8533460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp345354 
End bp345869 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content51% 
IMG OID646382723 
Productribosomal protein S5 
Protein accessionYP_003262250 
Protein GI261854967 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000051388 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAA ATTCTAACGA AGTTGCGACC GATGGCTTGA TCGAGAAACT CGTGGCTGTA 
AACCGGGTTG CCAAGGTCGT CAAAGGTGGT CGTATTTTTT CATTCACCGC GCTGACAGTT
GTTGGTGATG GTGAAGGTCG TGTTGGTTTC GGTTACGGCA AAGCGAAAGA AGTGCCAGCT
GCAATCCAGA AGGCCATGGA TCGCGCTAAG CGCAATATGG TTGATGTGCC TTTGCGTGAT
GGTACCTTGC ATTACTCGAC AGTTGGTCAT CATGGTGCCG CTCAGGTGTT CATGAAGCCG
GCCTCAGAAG GTACGGGTGT TATTGCCGGT GGTGCGATGC GTGCTGTATT TGAAGCTGTT
GGCGTGCGTA ACGTCCTTGC CAAATGCATC GGTACGCGTA ACCACATGAA TGTGATTCGC
GCTACCGTAA ATGGCCTGCA GTCAATCAGT TCACCAGAAA TGATCGCTTC CAAGCGCGGC
AAGCGTGTAG AAGAGATTGT CGGGAGTGCG TCATGA
 
Protein sequence
MSRNSNEVAT DGLIEKLVAV NRVAKVVKGG RIFSFTALTV VGDGEGRVGF GYGKAKEVPA 
AIQKAMDRAK RNMVDVPLRD GTLHYSTVGH HGAAQVFMKP ASEGTGVIAG GAMRAVFEAV
GVRNVLAKCI GTRNHMNVIR ATVNGLQSIS SPEMIASKRG KRVEEIVGSA S