Gene Hneap_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0338 
Symbol 
ID8533458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp344449 
End bp344976 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content49% 
IMG OID646382721 
Productribosomal protein L6 
Protein accessionYP_003262248 
Protein GI261854965 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000585971 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTG TTGCTAAAAA GCCCGTCGCC ATTCCCAAAG GTGTCGAGGT TAAATTGAAT 
GGTCAAGTCA TCTCATTCAA GGGGCCGAAA GGTCAGCTTG AATTGACATT GCACAAATCA
GTCAGTGTGG ATATGGCGGC TAACGAATTA CGTTTTGAGC CTGAGTCTGA TCAGTTCATT
GCTATGGCGG GCACCATGCG CGCTTTGGCA AACAACAATA TTCAGGGCGT ATCAGCTGGT
TTTGAGATGA AGCTGCAACT GGTTGGTGTG GGGTACCGTG CGCAGGTTCA GGGCAGCACT
CTGAACCTTG CACTGGGTTT CTCTCATCCA ATCAACTTCG CTATCCCTGC GGGCATCACT
ATTGAAACGC CTTCGCAAAC GGAAATCATT ATTCGTGGTG CGGATCGTCA AAAAGTGGGT
CAAGTGGCTT CCAATATCCG TGGTTACCGT CCGCCAGAGC CGTATAAAGG CAAGGGCGTG
AAGTACCACG ATGAAGTCAT CTTCCGTAAG GAAGCGAAGA AGAAATAA
 
Protein sequence
MSRVAKKPVA IPKGVEVKLN GQVISFKGPK GQLELTLHKS VSVDMAANEL RFEPESDQFI 
AMAGTMRALA NNNIQGVSAG FEMKLQLVGV GYRAQVQGST LNLALGFSHP INFAIPAGIT
IETPSQTEII IRGADRQKVG QVASNIRGYR PPEPYKGKGV KYHDEVIFRK EAKKK