| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0335 |
|---|
| Symbol | |
|---|
| ID | 8533455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 343174 |
|---|
| End bp | 343713 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646382718 |
|---|
| Product | ribosomal protein L5 |
|---|
| Protein accession | YP_003262245 |
|---|
| Protein GI | 261854962 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000680284 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTC TTCAGGAATT ATACACCAGT ACTTATCTGC CCCAGCTGAA AGAAAAGTTG
GGTCTCGATA ACGTCATGGC CGTTCCGAAG CTGACCAAGA TTACTTTGAA CATGGGCTTG
GGTGACTCGG CGCGTGACAA GAAAGTAATC GACAGTGCAG TGGATGAAAT GGCAGCAATT
TCGGGTCAAA AGCCCGTTGT GACTTATGCG CGTAAGTCGA TTGCCGGCTT CAAGCTGCGC
GAAGGGATGC CATTAGGCGT CAAGGTGACC TTGAGAGGAA GTACGATGTA CGAATTCTTC
GATCGGTTGA TCCAGATCTC TGTTCCTCGC ATACGTGATT TCCGCGGCCT CAATCCCAAG
TCGTTTGACG GTCGTGGCAA TTACAGCATG GGGGTGAAAG AGCAAATTAT TTTCCCGGAA
ATTGATTACG ACAAAATCGA TCAAATCCGC GGGATGGATA TCACGATCAC GACTACCGCT
CAGAATGATG ACCAGGCACG GGCACTGCTC GAATGCTTCG GTTTCCCATT CCGCCGGTAA
|
|---|
| Protein sequence | MARLQELYTS TYLPQLKEKL GLDNVMAVPK LTKITLNMGL GDSARDKKVI DSAVDEMAAI
SGQKPVVTYA RKSIAGFKLR EGMPLGVKVT LRGSTMYEFF DRLIQISVPR IRDFRGLNPK
SFDGRGNYSM GVKEQIIFPE IDYDKIDQIR GMDITITTTA QNDDQARALL ECFGFPFRR
|
|---|
| |