| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0306 |
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| Symbol | |
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| ID | 8533421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 315601 |
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| End bp | 317409 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646382684 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_003262216 |
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| Protein GI | 261854933 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.152867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTGAGG CCGTGGCTAA TCTGCCGACA GTTCATTACC GGCTGGATTT TTCCCGTGCT
CATATGCGCT ACATCGGCGT ATGCCTGAGC TTGCCTTCGG GTAACGCCGC TTCTGGCGCG
GCAGCTTGGC AGTTGAGCTT GCCCGCCTGG ATTCCCGGTA GTTATCTGAT CCGGGATTTT
GCCAAGAACC TGGTCGGCAT GAAGGCGCGT ACCGTCACGG GCCAGCCGGT CGCCATCACA
CCGCTGGATC AGCAGACCTG GCAGTTGCCG ACGTGCGATC AGGCGATTGA GGTGCGTTTT
GAGGTGTACT GCGCCGATTT TTCCGTTCGT ACCGCTCATG TCGATCCGGA TCATGCGTTT
TTCAACGGCA GCAGTGTTTT CCTGCGGGTG CACGGGCTGG AGCAACAGCC GCATTCCGTT
TGCCTTGAAG GGGCACCGGC GCACTGGCGC GTTGCCACGA CCCTGCCGGA GGTGGCGGTC
GACGATCTCG GTTTTGGGGA TTATCGGGCG GATGATTACG AAGCGCTGAT CGATTTCCCC
GTGGAAATGG GTGTGTTCGA AGTGGTGCGC TGGGTCAGTG CGGGCGTGCC GCATCGCATG
GTGTTCAGTC ATCCGCACCC TAAAACCGAT TTTGCTCGCA TTGCGCAAGA CGTTTCCCGT
ATTTGCAGCA CCGAAATCGA TTTTTTCGGC GAAGCGCCCT TTTCACGCTA TCTGTTTCTG
GTGGCGCTGG ATCGTCAGGG ATTTGGTGGT TTGGAGCACC GTGATTCCAC GGCGCTGATC
TTCCCGCGCG ATGATTTGCC CTTGATGGGC GAAACCGAAG TCACTCCGGC CTATCAGCGG
TTTTTGAGTC TGTGCGCCCA CGAGTATTTT CATTCCTGGA ACGTCAAGCG CATCCGCCCG
GATGCCTTCA CGCAACTGCC TTTGGCGCGT CCGGCGCACA CTCGGTTACT GTGGTTGTTC
GAGGGGTTTA CCAGTTATTT AGATGACTGG ATGGTGCGCC GTGCCGGTTT GATTACTGAA
TCGGCTTATC TTGATGCCTT GGCGCAAACC ATCAACCGTG CGGTGCGCGG CAAGGGGTGG
TCGCGTCAAA CGCTGGAAGA ATCGAGTTTC TATGCCTGGA CCCGCTTTTA TCAGCAAGAT
GAAAACGCCG TAAACGCCAT CGTCAGCTAT TACACTCGAG GCGCGCTCGT CGCGATGATG
CTTGATCTGC AACTTCGCTT GTGTGGCGGC AGTCTGGCTG CGGTCATGCG CGAAATCTGG
CGCGAATTCG GAGCCAAACC TCTGCCGGAG GGCGCGGCTA TTGAGCGATT TATTGAACGT
GTCGGTGAAC TTTCGCTGGG TGATTTTTTC GAGCAGGCGC TGCGCGGTAC CGAGCCCCTT
GAATTCGCCG CTTTGCTGGC CCGTTTCGGC GTGAATGCCG AGCCCGTGGC TGAATCGGCC
CTGTCATCGG TTGATGCCGG TGCGGTCATC GGCGGTGATG ATCCGCGCGT CGCCAAGGTT
CAAGTGGTAT TCGAAGATCG GCCTGCGGCT CAAGCGGGAT TGGTTTCGGG TGATGAAATC
ATCGCCGTGG ATGGTCTGGC CACGAGTGGC GCCGACTGGG GGAATCGAAT TTGTCGCTAT
CAAGCGGGCG ACGCGGTGCA ATTGACGGGT TTTCGGCAGG GGCGTTTGCA CCAATGGACG
CTGGTGCTGT CTGAACCCGT TCTGAATCAA TGGCGCCTGC GGCTGGCTTC CGAGCTGACG
GCGGTCGAAC CCGAGGCGTT ATTGCGTCGG CGCGACTGGC TTGCGGCTTC GCCCTCGGCG
CGTTCGTGA
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| Protein sequence | MVEAVANLPT VHYRLDFSRA HMRYIGVCLS LPSGNAASGA AAWQLSLPAW IPGSYLIRDF
AKNLVGMKAR TVTGQPVAIT PLDQQTWQLP TCDQAIEVRF EVYCADFSVR TAHVDPDHAF
FNGSSVFLRV HGLEQQPHSV CLEGAPAHWR VATTLPEVAV DDLGFGDYRA DDYEALIDFP
VEMGVFEVVR WVSAGVPHRM VFSHPHPKTD FARIAQDVSR ICSTEIDFFG EAPFSRYLFL
VALDRQGFGG LEHRDSTALI FPRDDLPLMG ETEVTPAYQR FLSLCAHEYF HSWNVKRIRP
DAFTQLPLAR PAHTRLLWLF EGFTSYLDDW MVRRAGLITE SAYLDALAQT INRAVRGKGW
SRQTLEESSF YAWTRFYQQD ENAVNAIVSY YTRGALVAMM LDLQLRLCGG SLAAVMREIW
REFGAKPLPE GAAIERFIER VGELSLGDFF EQALRGTEPL EFAALLARFG VNAEPVAESA
LSSVDAGAVI GGDDPRVAKV QVVFEDRPAA QAGLVSGDEI IAVDGLATSG ADWGNRICRY
QAGDAVQLTG FRQGRLHQWT LVLSEPVLNQ WRLRLASELT AVEPEALLRR RDWLAASPSA
RS
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