| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0283 |
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| Symbol | |
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| ID | 8533398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 289695 |
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| End bp | 293879 |
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| Gene Length | 4185 bp |
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| Protein Length | 1394 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646382661 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003262193 |
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| Protein GI | 261854910 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCTA CGCTAAATGA ACCACAGGAT GCCGCTGCCC CACAGTCGGC ACCGTTATCA
ACTGAGCCAG CCGACATTAT CGATTTTTTA CGTGCGAATC TGGCCGAGCT GCCGCTTGTC
GATCAACCAG CACTGTCTCG CCGGTTGGCT GGGGCTGAGC GTGCCTTGCA GCAGAATCGG
CTGGATGCGG GTCGGCTGGC CGAGCTGGTC ACGGCTTTCG AGGCCAGTGC GGCCTTGTTG
ACGGAGCGGC GTTCGGCAGA ATTGAACATC GATTATCCTG CAGAGCTGCC CGTCAGCGGC
CAGCGCGAGG CGATCATGGA TTTGATCCGC GCGCATCCGG TGGTGATCGT GGCGGGGGAG
ACCGGTTCCG GCAAAACTAC TCAGTTGCCC AAGATGCTGC TGGAGCTGGG CTTTGGCGTT
AAAGGCCAGA TTGGCCACAC CCAGCCTCGG CGCATCGCGG CGCGAAACGT GGCTAGCCGA
TTAGCCGAAG AGCTGGGCGT GACGGGCGCG GGCGTGGTCG GCTACAAGGT GCGTTTTTCC
GATCAAACCC GTGCGAGCAG TCGCGTCGCG GTGATGACTG ATGGCATTTT GTTGGCCGAA
ATTCACAGCG ATCCTGATCT GTTGCGCTAC GACGCGCTCA TTATTGATGA AGCGCACGAA
CGCAGCCTGA ATATCGATTT TCTGCTCGGC ATCGTGCGCC GCTTGCTCGA TCGTCGTCCT
GATTTTCGTT TGGTGATTAC CTCCGCCACC ATCGACACCG CCCGATTTGC TCGGCATTTC
GCCGGTACGG ACGCGTCGGG CGAACCGCAA CCCGCGCCGG TTATCACCGT GGCAGGGCGG
AGTTTCCCGG TCGAATATCG CTATCGGTCA TTGACTGCAC CACAGAATGA CAACGACACT
GAGACGGAGG AAGAACGGGA TCTGCCCGCC GCCGTCGTGG CTGCTGTCGA TGAATTACAT
GCAGAGGCGC AAACCACCGG CGGGGGCGAC ATTCTGGTCT TCCTGCCGGG CGAGCGGGAA
ATCCGCGAGT GCGCCCACCG GCTGGGTCGG CATGGTTTGC GCCATACGGA GATTTTGCCG
TTGTTTGCGC GCCTGTCCGC CGCCGAGCAG CAGCGCATTT TCGCGCAGCA CACGGGCCGG
CGCATCGTGC TGACCACGAA CGTCGCCGAA ACGTCACTCA CCGTGCCCGG CATTCTTTAT
GTGATCGATT CGGGCTTGGC GCGAATTGCC CGTTACAGCC CGCGCTCACG GGTGCAAAAG
CTGGCGGTGG AAGCGATTTC GCAAGCATCG GCGAACCAGC GTGCGGGCCG TTGTGGCCGA
ATCGCGCCGG GGGTGTGCAT TCGCCTGTTT GATGAGGCCG ATTACGCTGG CCGACCGGCG
TTCACCGATC CCGAAATTCT GCGCACCAAC CTCGCCTCGG TGGTGTTACG CATGATCGAA
TTGCGTTTGG GCGAGCCGGA GCATTTCCCG TTCATTGAAC CGCCCGATTC ACGGCAACTC
GCCGGTGCCC GCCGTTTGTT GTTCGAATTG GGCGCGCTCG ACGAGCGCCA GCGCATCACG
CCATTGGGGC GCCAACTGGC GCGCTTGCCG GTCGATCCGA CCTTAGGCAG GATGGTGTTA
TCAAACTTAT CGAAGGCAGA CGCCACCTCG GTGGATATCC TGATCGTCGT GGCCTTCCTG
TCGATACAAG ACCCGCGTGA ACGCCCAGCC GATCACGCGC AGGCCGCCGA TCAAGCGCAA
CAGGCGTTCC GCTTGGCCGA CTCGGATTTC GCGGGCATTC TGGCCCTGTG GGATCAATGG
CATACCGTGG TGCGACACGA GAACCAGCGC AAGCGGCGCG ACTGGGCGAA AAAGCATTTC
CTCTCGTATA ACCGGCTGCT GGAATGGCAC GATCTGTTCG GCCAGTTGCG TGAACAAGCC
GATGAAATCG GGCGGGTGAA ATTACCCGAT CCTTTGCCCT TGCCTGTGAT GACAGATGGC
GATGAAGCGC CACTGCGTGC GCGACTTGAT GCTCTGCATC AGGCAATGCT GCCTGGTTTG
CTGGCGCAGA TTGGCCTGCG CGATGAAGCC ACGCGAACAG ATAAAAACAC GCCAAAAGAC
AGCCGCGACC AACGCGGCAA GAAGCAGCGT ACGCCGACGA TCTACATCGG CGCGAACAAT
CGCCGCTTCC AGATTTTCCC CGGCTCCCAA CTGGCCAAAA CCCAGCCCAA ATGGCTTATG
AGCGCAGAAA TCGTAGAGAC GACCCGCGTC TACGCGCGCA TGAACGCCAC CATCAATCCG
CGCTGGATCG AGGATATGGC CGCGCATCTG ACCACGCGTG AATACAGCGA ACCGCGCTGG
GATCAACGGG GCGGACGCGT GGCCGCCTTT GAAACCGTCA AACTGTTCGG CTTGCCGATT
GTGACCAAGC GACGGATCGA TTTTGGCCGC ATTGATCCGC TGGGCGCGCG CGCGATCTTT
ATTCGTGCCG CCTTGGTTGA AGGGGAATTC GATAGCGGGC TCAAATTTTG GCGACACAAT
CAAGCCCTGA TCGACGAAAT TCGGGAAATC GAAGCGCGTA ATCGCCGCCC CGATTTGCTG
ATTGATGATC AAACCCTGTT CGATTTTTAC GAAACCCACC TGCCTGCGGA AGTCTACGAC
GCGCATACGC TGGTGCGCTG GTTGAAAACC ATCACGCCCA AACAGCCCGA TGTGCTCTGC
ATGACGCGCG ATGATCTGCT GGCGCGTGAG CCGGTCGAGC TCGATCCCGC GGGTTTCCCC
GATCGGTTGT CGATGGGCGC GTTCAGCTTG CCGCTGGCTT ATCACTTCGC GCCCGGCAGC
GCGGATGATG GTGTCACCCT GCGTCTGCCG TTGGCGGCAC TCAAACAAAT CGATGCCGAT
CGGGCCAGCC ACCTCATCCC TGGTTTGCGC CGTGAAAAGA TCGAAGCGCT GATTCGCAGC
CTGCCCAAAG CCGACCGCCG CCATTTCGTG CCCGCGCCGG AATTTGCAGC TTCCGTTAAT
GAACGGGTGT CCGTTGATCG TGGCGGCCTG CCGGCGCAAG TGGCCGAACA ACTGGCCCGC
ATGACAGGGC ACAAAATCAC CGCCGATGCC TTCGATGAAC GCAGGCTGGA ACCACATTTG
CGGATGCGAT TTGCCTTGAT CGACGCCAAG CAGACCGACC CGGATAAGCA AATCATCGAT
GCCGACCGCG ATCTTTCAGC CCTGCGGGCG CGTCACGCCG CCGCAGCCGA GCGTGCCCTG
GTTGAGCGCA CGCGCCATCG ACTGGAACGC GATGACCTCA TCGACTGGTC GTTCGGCGAA
CTGCCCGAAA GCCTCACGGT AGAAGAGCTC GGCGCTGAAC TCACCGCGTA CCCCGCCTTG
ATCGATCAGG GCGACTGCGC CGAAGTGCGC CTGTTCGATG CGCCGGAACG TGCCGTGCTG
GCGCACCGCT CCGGCGTGGT ACGCTTGATG CTTATCGCCC TGGGCGAGCA GATTCGGCAT
TTGAGCCAAT ACCTCAAACA AGAGCGCAGC CTCGACCCGG CGCGGTTGCA ATACAGCCAA
TGGTCGAACA CACGCCCTTT GCCCGCTTTT GGTTTGACCT TGCCCCAACG GCGCGATGCC
GCGTTCGATC AGGCGTTAAT TGCTCGCAGC ATCGCCAAAC TCGCCGTAGA CGCCTTACCC
TTCATTCGAG ACGAGTCCAC ATTCCGTGCC CGCGTCGAAC GATTGAAGCC CCAACTGGAT
GATACGGTGC GCCGATTGGC AGCCCAAATA CGCACGATCT TCGCGCAACA TCAGGCCCTG
CGCGCCAAAC TCAAAGGCCG CCTGCCCCTG TCGCAAATCG AAGCCGCGCG CGAAATTGCC
GAACAATTCG ATTTATTGTT CTACCCCGGC ATGATCTGGA ACACCCCGCA AACCCTGCTC
GACAACCTGC CGCGCTACCT CACCGCCGCT GAAAAACGCC TAGAAAAAAT CGACCGCCAC
CCCGAACGCG ACCGCATGTT GCGCGTACAG TTCATGCCCG TCTGCGCCCG CGTCACAGAC
AAAATCACCG CAACCGCACC CACCCCGGAA GCGTTCGCAG CACTCAATCA ATTGCATGAA
CAACTCGAAG AATGGCGCGT CGCCACCTTC GCGCAAGAAC TGGCCCGCAA AGGCGCACCC
GGCGCCAAAG AAATCGAGCA AGCCATCAAA CAACTTTCGC ATTAA
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| Protein sequence | MNSTLNEPQD AAAPQSAPLS TEPADIIDFL RANLAELPLV DQPALSRRLA GAERALQQNR
LDAGRLAELV TAFEASAALL TERRSAELNI DYPAELPVSG QREAIMDLIR AHPVVIVAGE
TGSGKTTQLP KMLLELGFGV KGQIGHTQPR RIAARNVASR LAEELGVTGA GVVGYKVRFS
DQTRASSRVA VMTDGILLAE IHSDPDLLRY DALIIDEAHE RSLNIDFLLG IVRRLLDRRP
DFRLVITSAT IDTARFARHF AGTDASGEPQ PAPVITVAGR SFPVEYRYRS LTAPQNDNDT
ETEEERDLPA AVVAAVDELH AEAQTTGGGD ILVFLPGERE IRECAHRLGR HGLRHTEILP
LFARLSAAEQ QRIFAQHTGR RIVLTTNVAE TSLTVPGILY VIDSGLARIA RYSPRSRVQK
LAVEAISQAS ANQRAGRCGR IAPGVCIRLF DEADYAGRPA FTDPEILRTN LASVVLRMIE
LRLGEPEHFP FIEPPDSRQL AGARRLLFEL GALDERQRIT PLGRQLARLP VDPTLGRMVL
SNLSKADATS VDILIVVAFL SIQDPRERPA DHAQAADQAQ QAFRLADSDF AGILALWDQW
HTVVRHENQR KRRDWAKKHF LSYNRLLEWH DLFGQLREQA DEIGRVKLPD PLPLPVMTDG
DEAPLRARLD ALHQAMLPGL LAQIGLRDEA TRTDKNTPKD SRDQRGKKQR TPTIYIGANN
RRFQIFPGSQ LAKTQPKWLM SAEIVETTRV YARMNATINP RWIEDMAAHL TTREYSEPRW
DQRGGRVAAF ETVKLFGLPI VTKRRIDFGR IDPLGARAIF IRAALVEGEF DSGLKFWRHN
QALIDEIREI EARNRRPDLL IDDQTLFDFY ETHLPAEVYD AHTLVRWLKT ITPKQPDVLC
MTRDDLLARE PVELDPAGFP DRLSMGAFSL PLAYHFAPGS ADDGVTLRLP LAALKQIDAD
RASHLIPGLR REKIEALIRS LPKADRRHFV PAPEFAASVN ERVSVDRGGL PAQVAEQLAR
MTGHKITADA FDERRLEPHL RMRFALIDAK QTDPDKQIID ADRDLSALRA RHAAAAERAL
VERTRHRLER DDLIDWSFGE LPESLTVEEL GAELTAYPAL IDQGDCAEVR LFDAPERAVL
AHRSGVVRLM LIALGEQIRH LSQYLKQERS LDPARLQYSQ WSNTRPLPAF GLTLPQRRDA
AFDQALIARS IAKLAVDALP FIRDESTFRA RVERLKPQLD DTVRRLAAQI RTIFAQHQAL
RAKLKGRLPL SQIEAAREIA EQFDLLFYPG MIWNTPQTLL DNLPRYLTAA EKRLEKIDRH
PERDRMLRVQ FMPVCARVTD KITATAPTPE AFAALNQLHE QLEEWRVATF AQELARKGAP
GAKEIEQAIK QLSH
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