Gene Hneap_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0276 
Symbol 
ID8533391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp281209 
End bp282558 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content61% 
IMG OID646382654 
Productouter membrane efflux protein 
Protein accessionYP_003262186 
Protein GI261854903 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0967709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTCT TATCGCCTTC GCCGTGGTGT TTGACCCGGT GGGTTTTGAC TCGGAGCCTG 
ATGCCGATTC AGCATTCGTT GCGCACGCTG GGCATGTTGC TGATCGTTAT CCTCGCTCTG
TCGGGGCTGG CACAAGCCGG TCAGAACACG TCGGGTCGTT CAGAACAACC CGTCTTTTCA
ATAAGTCCGG ATGCCACGCT TTCACTTCAG GAAGCCGAAC AGTTGGCGGT GCAGAATGAT
CAGGGTTTGG CTGCTGCGGT AGCGACCGAA TCGGCAGAAA CCAGTTCGGC CAAGGCGGCC
GATCAACTGC CCGACCCTGA GATTTCGCTC GGTGTATCGA GTCTGCCGCT CGATACCTTC
AGTTTCACGC AGACGCCCAT GACGACCACG GAGGTCTCGA TCAGCCAGTC TTTGCCACCG
GGCGACACCT TGGCGCAGCG TGCCCTGGCC GCCGACGCGA AGATACAGGC CGCAACCGCA
AACATCGCCG TGCAGCAACA GATACTGCGG CGTGAAGTGG GCCGGTTCTG GTTGACCGTC
TACCGCGATC AGCAAACGCT GGCGCTGCTT GCACAGGAGA AGTCGTTGTA TCAGCGCCTT
CTGCGCAGTG CGCAAACGGC CTACAGCACC GGACGGGCCC GAGCGACGGA TCTGGTTCGA
TTGCAAGTGC GCTTGGCGGA ACTGGATGAT CGCATCGACC GCCAGCGGGG CAGTACGGCG
GCGACGAAAG CACGCCTGGC CCGCTGGATC GGGGCACGGG CACAGCAAGA TTGGCCCACG
GCTCTGCCTT CCGCGCTGAC AACCCTGCCC GAGGGGTCTG TGGAGCATCA ACCTGAAATC
AAAGCCTTGC AGGCGAATCT GGCCGAGGCC CGCGCGCAAA CGGGCGAGGC GCGTGCCGCG
TTCAAACCGA AGTTCGGTGT CTCGCTCGGG TACGGCATCA AGGCGGGCAA CCAGCCGGAT
ACGGTGAGTG TGGGGGTGAG CATGAGCTTG CCGCTCTTCA CCGGTGAACG CCAGGCGCCC
CTGCTGGCGG CGGCGCAAAA ACGGCAACAG GCGCGGCAAT TGGCGCTGGA AAGCCGTGCC
GCCGATTTTC ATGCCGAGGC GCAGTCGCTC AACGCCGATG TGGACAGCCT GACGAGTCGG
ATCGATCGTT ACGATCGGCA GATTCTGCCT AAACTCAGGC AGGTCGCGAC CTTGGCGCAA
AACCAGTTTG GCTCTGGCAG CGGAGATTTT ACGGCCATTA TCGATGCTGA ACAGGCCGAA
ATTACCGGTC GTCAACAACG CCTCGATTTA ACGATTGATC GCGCCCAACG CTTGATCGAT
CTGCGTTACC TTCTGGAGAA TCCCGCATGA
 
Protein sequence
MPFLSPSPWC LTRWVLTRSL MPIQHSLRTL GMLLIVILAL SGLAQAGQNT SGRSEQPVFS 
ISPDATLSLQ EAEQLAVQND QGLAAAVATE SAETSSAKAA DQLPDPEISL GVSSLPLDTF
SFTQTPMTTT EVSISQSLPP GDTLAQRALA ADAKIQAATA NIAVQQQILR REVGRFWLTV
YRDQQTLALL AQEKSLYQRL LRSAQTAYST GRARATDLVR LQVRLAELDD RIDRQRGSTA
ATKARLARWI GARAQQDWPT ALPSALTTLP EGSVEHQPEI KALQANLAEA RAQTGEARAA
FKPKFGVSLG YGIKAGNQPD TVSVGVSMSL PLFTGERQAP LLAAAQKRQQ ARQLALESRA
ADFHAEAQSL NADVDSLTSR IDRYDRQILP KLRQVATLAQ NQFGSGSGDF TAIIDAEQAE
ITGRQQRLDL TIDRAQRLID LRYLLENPA