Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0251 |
Symbol | |
ID | 8533366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 256158 |
End bp | 257315 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646382629 |
Product | Carbohydrate-selective porin OprB |
Protein accession | YP_003262161 |
Protein GI | 261854878 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGAC TCCCAAGTTA CGTTACCATC CTCCTGATTG TTCTTGTGAT CCCGCCCATA CTGGGTTCGG GCGCATGGGC GACCGAATTT ATTCTGAACC GTCCAGCACC TACGGCAGCC AGCCATCCGC TGCCCCTCGA CGAATCACAG ATCTTTTCTT TACACGGCCA CTGGGATACC GATTGGGTTA ACAATCTCTC CGGCGGTATT CGTCGCGGCA ACGCGCTCGA CAGCGTCGCG GTGGGCGGTT TTACCCTCAA GGGCGATCGT TTGGGCCTGC CCAACAGCGT GTTCAATTTC TCACTCATGG CGACTCGCGT GGGCGACGCC AATGCAGAAT TGATCGGAGC AGACACCAAC CCGAGCAATA TCGAAGGCAA CCGCAATCGG CTGGTGCTCA ACACCGCGTT CTGGCAACAG GACTGGTTGA ACTCACCTCA TATCGGTCTC AACACCCGAT TGGGTGTATT CGATTTGAGC GCTGAATTCG ATAGCACCGA TGGCGCCGCG CAATTGCTCA ACAGTTCGTT TGGTCTCGAC CCGACGATCA CCGACAATTT CGCCGCATCG ACTTTCCCCA AGAACGGTAC CGGGCTCGTG ACCAGCATCG CCAGCGCCAT CGATCCGGAT ACCGCCCCCT TCGCGTTAAA GGTCGGGTTG ATTCAGGGCG ATGTCAATCA ACAAACCCAC CCATTCACTC AAGGCGTTTT GAACATCGCC GAAGGGCAAT GGCGCCCGAG CAAAGGCACA GCCATTAAAC TCGGCGGCTG GCAAAAACGA GGCAACGGCC TGCATGATCT GCGCGGCGGC TATCTCAGTG CCGAAACGCC GCTCAGTTCA GAGCAACACC AGCACATCAG CGGCTTTATT CGCGCCAGCT TCGCATCTGG CATGGGTGCA CAAACCAACG GAGCCAACCG ATACCTTGGC GCGGGCCTCA ATTGGCAAGC ACCGTTCGCA CATCGACCGG ACGATTACCT CACGCTCGGG GCAGCCACAC TGCATTTGAA TCATGGCGGC GATCACGAGC GGCTGCTCGA AGCGGCCTAC ATTATGCAAA TCACCCCGCG CATCTTTCTA CAACCCGACG TGCAATACAT CCAACAAAAC AACCAGCCCG ATACCTGGGT GGCTATTGTC CGCCTGCATC TTGAATAA
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Protein sequence | MSRLPSYVTI LLIVLVIPPI LGSGAWATEF ILNRPAPTAA SHPLPLDESQ IFSLHGHWDT DWVNNLSGGI RRGNALDSVA VGGFTLKGDR LGLPNSVFNF SLMATRVGDA NAELIGADTN PSNIEGNRNR LVLNTAFWQQ DWLNSPHIGL NTRLGVFDLS AEFDSTDGAA QLLNSSFGLD PTITDNFAAS TFPKNGTGLV TSIASAIDPD TAPFALKVGL IQGDVNQQTH PFTQGVLNIA EGQWRPSKGT AIKLGGWQKR GNGLHDLRGG YLSAETPLSS EQHQHISGFI RASFASGMGA QTNGANRYLG AGLNWQAPFA HRPDDYLTLG AATLHLNHGG DHERLLEAAY IMQITPRIFL QPDVQYIQQN NQPDTWVAIV RLHLE
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