| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0232 |
|---|
| Symbol | |
|---|
| ID | 8533347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 244073 |
|---|
| End bp | 245356 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646382610 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003262142 |
|---|
| Protein GI | 261854859 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGCA AGGAAGCCGC TGAACCCATC ATTGCTGTCA TCGGCCTAGG CTATGTCGGC
CTGCCGCTCG CGGTCGAGTT CGGCAAAATA CGCCCCGTGA TCGGCTTTGA TGTTGATGCC
ACCCGCATTG ACCAATTAAA AAGCGGCCAC GACCGCACGC GCGAAGTCGA GCCGGATGAG
CTGCAAAACG CCCGCCACCT GAGTTATACC GTCGATCCTG CCGATCTGCG AAAAGCCAGC
CTATTTATCG TCACCGTGCC CACGCCGATT GACGCGCACA AACGCCCGGA CCTCAGCCCG
CTGATCAAAG CCAGCGAAAC CGTCGGGCGC GCGCTCAAAC GCGGCGATAT CGTGATTTAT
GAATCCACCG TCTACCCCGG CGCCACCGAA GAAGACTGCG TGCCGGTGCT CGAACAATAC
TCCGGCCTGC GCTTCAACCA CGATTTTTAC TGCGGCTACA GCCCAGAGCG CATCAACCCC
GGCGACAAAA CCCACCGCCT GCCCGCCATC AAAAAAGTCA CCGCCGGTTC CACCCCTGCC
GTGGCCGAAG CGGTCGATGC GCTCTACCGG CAAATCATTA CCGCCGGCAC CCACCCAGCG
CCCAGCATCC GCGTGGCCGA GGCCGCCAAG GTGATTGAAA ACACCCAGCG CGATGTCAAT
ATCGCGCTCA TCAACGAACT GGCCATCTTA TTCGGCAAAC TCGGGCTCGA TACCCAAGCC
GTGCTCGAAG CGGCGGGCAG CAAATGGAAC TTCTTGCCGT TTCGCCCCGG CCTGGTAGGC
GGCCACTGCA TCGGCGTGGA CCCGTACTAC CTCACCCACA AAGCCCAGCA AGTCGGCCAT
CACCCTGAAA TGATATTGGC CGGTCGCCGC ATCAACGACG GCATGGGCGC GTATGTGGCC
GGCCAACTCA TCAAAGCCAT GCTGAAAAAA GGCATCACCG TACAAGGCGC GCGCGTACTC
GTGCTGGGGC TCACCTTTAA AGAAAACTGC CCCGATCTAC GCAACACCCG CGTCATTGAT
GTGATTACCG AACTCAAAGA CTACGGCCTA ACCGTCGATG TGCACGACCC TTGGGCCGAT
GCCGCTTGCG CACGGCATGA GTACGGACTT GAGCTTACCG CCACGCCACC ATCAAATACC
TATGAAGCCA TCGTGCTGGC CGTTGCCCAT CGAGAATTCA GAACCTTGGG CGCACCAGCC
ATTCACGCAC TCGGCAAAGA ACAGCATGTG CTCTACGACC TCAAACACCT CTTTCATGCC
GATGAAGCCG ACATTCGGTT GTAA
|
|---|
| Protein sequence | MKSKEAAEPI IAVIGLGYVG LPLAVEFGKI RPVIGFDVDA TRIDQLKSGH DRTREVEPDE
LQNARHLSYT VDPADLRKAS LFIVTVPTPI DAHKRPDLSP LIKASETVGR ALKRGDIVIY
ESTVYPGATE EDCVPVLEQY SGLRFNHDFY CGYSPERINP GDKTHRLPAI KKVTAGSTPA
VAEAVDALYR QIITAGTHPA PSIRVAEAAK VIENTQRDVN IALINELAIL FGKLGLDTQA
VLEAAGSKWN FLPFRPGLVG GHCIGVDPYY LTHKAQQVGH HPEMILAGRR INDGMGAYVA
GQLIKAMLKK GITVQGARVL VLGLTFKENC PDLRNTRVID VITELKDYGL TVDVHDPWAD
AACARHEYGL ELTATPPSNT YEAIVLAVAH REFRTLGAPA IHALGKEQHV LYDLKHLFHA
DEADIRL
|
|---|
| |