Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0213 |
Symbol | |
ID | 8533328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 221411 |
End bp | 222358 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 646382591 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003262123 |
Protein GI | 261854840 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.402452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATG CGGCGACACT CGGCGCGCGC AAATTGTTGC GTCACGCCAC TTTGCGACAG GTTGAAGTGT TTGAATCGGT GGCGCGGCAT GTGAGCTTCA CGCGCGCGGC GGAAGAACTT CATCTCACGC AGCCTTCGGT TTCGGCACAG GTGAAAAGCT TGGCGGAGGT GGTCGGCGAA CCCTTGTATG AACAAGTCGG GCGGCGGATT TATCTCACCG ATGCCGGCCA GATTGTTGAG CGCAGTTGCC GTGAAGTGAT CGATATTTTA TCCAATGCCG AAATGTCGCT CAGTGAATTA AACGGGATGC GCAAAGGGCG ATTGCGCTTA TCGGTGATCA CCACAGCCAA ATATTTTGCA CCGCTGGCGT TGGGTGATTT TTCATTGCAG TACCCTGATA TTGATCTGGA ACTCGTGATT TCTAATCGCG ATACGCTCCT AAAACGCATT GAAGATAACC GCTCGGATTT GTATGTCATG GGGCAATTGC CGCGCACGCG ACTTGATCTG GAAGTGATTC CGTTTGCGCC CAACCCATTG GTGGTGATCG CGCATCGGGA TCACATCTTG GCAAAAGAGC GCAATATATC CATGGAACGC ATCGCGCAAG AGTCTTTTAT CATGCGTGAA CCCGGTTCAG GCATTCGCCA TAAGGTCGAA GAGCACTTCG CCCGCCACCA GCAAAGTATC AAAACGCGTC TCGTGCTCGA TGGTAATGAG GCAATCAAGC ATGCGGTCGC TGGGCGATTA GGCATTTCGG TGGTGTCCGC TCATGCCTTA AATCTTGAAA ACAGCCAAGA GCCGCTCGTG AAGTTGGATG TGCAGAGCTT TCCGCTTCAG AGCATGTGGA ATATTGTCTA TCCCCGTGGA AAAGCGCTGT CGGTGGTTGC TCGCCAGTTT CTGTCGTTTC TCAAAATTCA TGGCGGCGAT TATTTGCACA TTGGTTGA
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Protein sequence | MTDAATLGAR KLLRHATLRQ VEVFESVARH VSFTRAAEEL HLTQPSVSAQ VKSLAEVVGE PLYEQVGRRI YLTDAGQIVE RSCREVIDIL SNAEMSLSEL NGMRKGRLRL SVITTAKYFA PLALGDFSLQ YPDIDLELVI SNRDTLLKRI EDNRSDLYVM GQLPRTRLDL EVIPFAPNPL VVIAHRDHIL AKERNISMER IAQESFIMRE PGSGIRHKVE EHFARHQQSI KTRLVLDGNE AIKHAVAGRL GISVVSAHAL NLENSQEPLV KLDVQSFPLQ SMWNIVYPRG KALSVVARQF LSFLKIHGGD YLHIG
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