| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0212 |
|---|
| Symbol | |
|---|
| ID | 8533327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 219465 |
|---|
| End bp | 221120 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646382590 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_003262122 |
|---|
| Protein GI | 261854839 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATAG AGTTCAGCCA CACAACCGGT CTTCTCCTGC TGGCCATGCC CGCACTGCTC
CTTATGGCCG CTGTAATCAA ACCCAAGCAA GGTGCTGCTT ATGCGCGCGC TTATCGGCAA
CGGGTTCAAT GGACCAGTTT TGCGGCCTTT GGCCTGGCCC TGCTCGCTGT CGTCAGTTTT
CTATTTGCAA GGCAACAGAA TCTGATGCTC GGTGCCGGTA GCCTCCCTGC CGGATTGGGA
TTATTGGCGC TTTCAATTCA AGTCAATGGC CTGACTCTGG TGCTGGCAAG TCTGGTTAGT
TTTGTGCTTA GCGTGATTGC CCGCTACAGC GTGCAGTATC TCGATGGTGA TCCCCAGCAG
GCCCGCTTTT TCCGCTTGCT GGCGGTCACC GGCGGATTTT TCCTGTTGGT CGTCATATCA
GGCAATTTGG GATTATTCAC CCTCGCCATC ATTGCGACCG GTTTTGGTTT GCATCGACTG
CTTTCTTTTT ATGCCGATCG GCCGCGCGCG ATCATGGCCA CACATAAAAA ATCAATTTTC
AGCCGGACTG CCGACGCCCT TTTGCTCGCG GCCACCGTCT TGATCGGTCA TCAAATCGGT
AGTTTGGAGT TCAGCCAAAT CAGCGCCTAT GTTCATGCGC AAGACCACCT ATCCATTGCG
TTGCACGTGG CTGCTTGGCT GATCGTGCTG GCCGCCATCC TTAAAAGCGC GCAATTTCCG
TTTCATGGCT GGCTGATTCA GGTCATGGAA GCACCCACGC CGGTTTCCGC GCTCATGCAC
GCCGGTGTCG TTTACAGCGG GGCAATCATT GTGCTGCGCA CCAGCGAATT ATTGGCCGCC
GACGGTACCG CCCTGTTGCT TCTGGCCCTG ATTGGTTTGA TGACCTTGGC TATCGGCTCG
TTGGTCATGC TGACCCAATC GGCGATCAAA TCATCACTGG CCTGGTCTAC CGCCGCTCAG
CTCGGCTTCA TGATGCTCGA ACTGGGTTTG GGGTTGTTTG GCTTGGCCTT GCTGCACTTG
GTTGGCCACT CGCTCTACAA GGCCCATGCG TTCTTGTCCT CGGGCAGCAT GACCGATCAC
CTGCGTCAGG CCAAAGTGCT CAAAAACCGC CCAATCTCTG TTGTGGCCTG GTTTACCACG
GTGATTGTGA GCGGCTTGTT CACCCTCGGT ATCGCGGCGG CGATGGGTTT ATCGATCGAT
CAGGAGCCGA TGTTGCCCGC CGTGCTGACC ATCATCGCCT TGGCGACCGC TCAGTTGATG
CTCAAGGCAT TGAGCCATGG CACATGGCGT GAAATTCTGG TCGCCGCAGG CGCGGCAATC
GCCATGACCG GCGTGTATGT CTTCCTGCAT GAGGTGTTCA TCACAGGCTT TGCCGACACG
CTGGCCGCGA CACCGCAACG TGCGCCGCTG CTCGATCTGC TGTTGATGGC GATCACGATC
ATAACCTTCC TGTTTGTTGC CTGGCTTCAA GGCCCCGGCA AAACCTTGAT GAGCCCGGAG
CGACAATTCG CCTTGTTTGT TCACCTCAAT AACGGGCTGT ATCTCGACCG CTGGGTCGAA
CGCTTGGCCT TCCGTTTCTG GCCGGAGAAA GTTGGCCGCG CACCGAAAAA ATCCTGCGCC
GTGATTCCGC CTAACCCATC CGGTATCGAG CCGTAA
|
|---|
| Protein sequence | MTIEFSHTTG LLLLAMPALL LMAAVIKPKQ GAAYARAYRQ RVQWTSFAAF GLALLAVVSF
LFARQQNLML GAGSLPAGLG LLALSIQVNG LTLVLASLVS FVLSVIARYS VQYLDGDPQQ
ARFFRLLAVT GGFFLLVVIS GNLGLFTLAI IATGFGLHRL LSFYADRPRA IMATHKKSIF
SRTADALLLA ATVLIGHQIG SLEFSQISAY VHAQDHLSIA LHVAAWLIVL AAILKSAQFP
FHGWLIQVME APTPVSALMH AGVVYSGAII VLRTSELLAA DGTALLLLAL IGLMTLAIGS
LVMLTQSAIK SSLAWSTAAQ LGFMMLELGL GLFGLALLHL VGHSLYKAHA FLSSGSMTDH
LRQAKVLKNR PISVVAWFTT VIVSGLFTLG IAAAMGLSID QEPMLPAVLT IIALATAQLM
LKALSHGTWR EILVAAGAAI AMTGVYVFLH EVFITGFADT LAATPQRAPL LDLLLMAITI
ITFLFVAWLQ GPGKTLMSPE RQFALFVHLN NGLYLDRWVE RLAFRFWPEK VGRAPKKSCA
VIPPNPSGIE P
|
|---|
| |