| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0208 |
|---|
| Symbol | |
|---|
| ID | 8533323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 212879 |
|---|
| End bp | 214294 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646382586 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003262118 |
|---|
| Protein GI | 261854835 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0149972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGAA AAAACCGCAC GCCGCGTGTA TGGAGTTTGT TCTCGACAAC GGCGCTGACC
CTAATAGCCA GCGTGAGCTT TATTCTCGTA TTCGCCTTGA GCGCCGTAAC CTGGTTTGCC
ATGGTGCCGA TGGCCAAGCG TTCCGCCGAT GATCTGGCGG CCTTGATCGT GCTCTCAGCG
CAGACTTGGG TTGAGCTGCC CAAAGACGCC CAACCGCTTT TAGCCGCCGA GCTCAAGGAT
CAGCATGGCA TTGAGATAGA AGAAATCCAG ACACTGAGTC GGCAACATGG CACCGTATTG
CCCTATGTGC GCTTTTTGCA CGATGCGGTT GTTCGGCGCT TGAATGCGTG CCCGCCCAAC
ACGAAAGACC CCGCAACGGG AGAGTGCGTG TACATGGGCA TACTTCCCAA TAATGCGGGT
TATTGGTTGG AATTGCCGAT GGCCGATGAT GTTCTGCGCT TCGAGTTCTC ACCGGATCGT
GTGGGCTACC GCATTCCTTT TACGCTCGGC ATCATCTTGA TCGGCGGGAT CGTGCTTACC
CTTATTCTGG CGCTGTTTTT GACGCGTCGG CTCACGCGCC CGGTCAGCCA GCTTGCAGAG
CAGGTCAGCC GAGGTTTGCC CGATGCGCCT CTCCCGTTGA CCGGACCGCA GGAGACCCGA
GTGCTCATTG ATGCGGTTAA TCGCCGATCT GCCGAAGTGG CGCGGCTACT AGAGAATAGA
ACCGTATTGC TGGCCGGGAT CTCACATGAT CTGCGCACAC CGCTCACGCG TTTGAGCCTC
GGTCTGGCGT TGACGCAAGA CGATATCGAG CCGGCGCTGC AAGCCCAGAT GCAGGCTGAT
ATCGAACAGA TGAATCGGTT GATCGCTGAG GTTTTGCACA TTGCACGAGG AGTGAGTCAG
GACAGCAGTG AGCCGATCCC GTTGTATCCG TGGTTGACAC GATTTGCTGC CGAATGGGAA
CAAAGAGATA CGGGAATTGC ACTCATGGTG GACGAGGCTA CCAAGATGTT AGAAATCGAT
GTTGCCACGG ATAGCCTGCA ACGGATTCTG GATAATCTGG TCGAAAATGC GCATCGTTAT
GGCCGCCCAC CCATCATATT GCGTTCCGTG CAGACCGAGG ATGCACAAAT ATTGTGCGTT
GAGGACGAAG GGCAAGGATT GACCGTTGCG GAAATCGGTC GCCTGCGTGA GCCCTTCGCT
CGCAAGGATG AGGCCCGATC CGGCGTAACC GGCTACGGAT TGGGCCTGAG CTTGGCGCAG
GCCTTGGCTC AAGCGCAGGG GTGGACGCTT GATTTGTACG CTCCGGGCGA GCACCCCTAT
ACCCCTGATG GCCTCATGCC CAAAGGGTTG GTAGCATGTC TTCGCTTACC AAGAGCCGTC
GCGCCTGTTC GTCCGCTTTC ACCGAGAAAC ATATAA
|
|---|
| Protein sequence | MIRKNRTPRV WSLFSTTALT LIASVSFILV FALSAVTWFA MVPMAKRSAD DLAALIVLSA
QTWVELPKDA QPLLAAELKD QHGIEIEEIQ TLSRQHGTVL PYVRFLHDAV VRRLNACPPN
TKDPATGECV YMGILPNNAG YWLELPMADD VLRFEFSPDR VGYRIPFTLG IILIGGIVLT
LILALFLTRR LTRPVSQLAE QVSRGLPDAP LPLTGPQETR VLIDAVNRRS AEVARLLENR
TVLLAGISHD LRTPLTRLSL GLALTQDDIE PALQAQMQAD IEQMNRLIAE VLHIARGVSQ
DSSEPIPLYP WLTRFAAEWE QRDTGIALMV DEATKMLEID VATDSLQRIL DNLVENAHRY
GRPPIILRSV QTEDAQILCV EDEGQGLTVA EIGRLREPFA RKDEARSGVT GYGLGLSLAQ
ALAQAQGWTL DLYAPGEHPY TPDGLMPKGL VACLRLPRAV APVRPLSPRN I
|
|---|
| |