| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0204 |
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| Symbol | |
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| ID | 8533319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 206312 |
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| End bp | 209416 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646382582 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003262114 |
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| Protein GI | 261854831 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.48458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATC GTCTCATTGC CTTCTCGCTC GCCCAACGCC TCATGGTGCT GCTGGCTGCG
ATACTGGTCG CTGGTTTCGG CTGGATGGCC TTTTCCACCA TTCCAATCGA CGCCTACCCG
GATATTTCGC CAACCCAGGT ACAGATCATC CTCAAAGCCC CCGGTGTCAC GCCGACGGAA
GTCGAAACCC GCATTACCGC GCCACTGGAG ACATCCTTAC TGGGCATCCC GAACCAGACC
ATGCTGCGTT CGACCTCCAA GTACGGCATA TCGGTGATTA CGCTCGATTT TGCCGAAGGC
ACCGATATTT ACTGGGCGCG GCAGCAGGTG AACGAAGCCT TGTCTTCCGC CCGCGGTGAT
TTACCTGCCG GCACGACTGG CGGCGTCGCG CCGATCACGA CGCCACTGGG CGAAGCCTTC
ATGTTCACGC TCCAAAGCCC CACGCTCTCG CTGACCGAGC GGCGGCATCT GCTCGATTGG
GTGATCCGCC CGGCGCTGCG TGCGGTCAAG GGCGTTGCCG ATGTCAATTC TCTGGGCGGC
TTTGTTCGCA CGTTCGAGGT TATCCCGAAC CCGACGCAAC TGGCAGCACA GAAGCTGACA
ACGGATGATC TGATGCGGGT CATCGAGCAG AACAACCGCA ATGACGGCGC CGGAAGGCTG
GATGTGGGCG AAGAAGCCTG GCTGGTACGT TCCGAAGGGC GGATCAAGAC GCTGGATGAT
CTGGGCAACC TCGTCATCGC ACAACATAAC GGCCAACCGA TTCATGTGCG TGATGTCGCC
ACGGTGCGCA TCGGCGCGAT CACCCGCCTG GGCGCCGTGA CGCACAGTGG CAAGGGCGAA
ACCGTTGAAG GTCTGGTATT GACTCTGCGC GGCGCCAATG CACGCGCGGT CGTGGCGGGT
GTCGAGCAGC GACTGGCCGA AATCAAGCCG AGCCTGCCAC CCGATCTTAA GATCAACGTA
TTCTACAACC GTGCCGATCT GGTCAATGCA GCCGTGCATA CCGTCAGCAA GGCCCTGCTT
GAAGCCGTGG TGCTGGTGCT CATTCTTCTG ATTCTTTTTC TGGGCAATCT GCGCGCTGCC
GTTACGGTCG CGCTCACCTT GCCGATGGCC GCGCTCATCA CCTTCATCCT GATGAAGCAG
TTCGGCATGA GCGCGAACCT GATGAGCCTA GGTGGCCTGG CGATTGCCAT CGGGATGCTG
GTGGATGCCG CCGTCGTCGT GGTCGAAAAC ACCGTGGCGC ATCTGGCCGA AGCGCACAAA
CACCCCAATC TGCCGCGCCT GCACATCGTG TATCGCTCGG TGCGTGAAGT CGCCGCCCCC
GTGTTTTCCG GCATTCTCAT CATCATGCTC GTGTTCCTGC CGCTGCTGTC GCTGCAAGGG
CTGGAAGGCA AGTTGTTCTC GCCGGTCGCG CTGACCATTA TCTTTGCGCT GGGTGCCTCG
TTGGTTCTCT CACTTACCCT GATTCCGGTG ATTGCATCCT TGATCCTCGG CAAGGTGACC
GATCACGAAC CCTGGCTTGT GCGTCAACTG CATCGCATTT ACGAACCGGC GCTCAACTTC
GCGTTGAAAC GCCCGTTGCC TGTCGTGGCG GTGGCCATCG CGGGGCTTGT GGTGGCGGGC
CTGCTGTACA CCCAGATCGG TAAAACCTTT ATGCCGAGTC TCGATGAAGG CACCATCGTC
ATGCAGGTGG AAAATCTGCC TTCGACCAAC CTCGGCACCA CGATCGCGCT CAATACCAAT
ATTCAGAAAA CCCTGATGGC GAAGGTGCCG GAAATTGCGC AAATCGTAGG TCGCTCGGGA
TCGGATGAAC TCGGCCTTGA TCCGATGGGC CTGAACGACA CAGACACCTT CATCATCCTC
AAACCCAAGG ATCAGTGGCA GGCGAGTAGC ATCGATGAAG TGCGCGAAAA AATTCGTGCC
GTGATCAGCA CCCTGCCCGG CTTTAATTTC AGTTTTACCC AACCGATCGA AATGCGGGTC
TCCGAAATGC TGACCGGTTC GCGCGGCGAT CTGGCCATTA AAATTTTCGG CAGCGATTTG
ACCGAAATCA ATACGCTGAG CAACGAAATC AAATCCGTCG TCAGCGCGAT TCCCGGCGCT
CAGGACGTAG CCACAACCGA CAATGAAGGC TTGTTGTATC TCAACATTGC CGTGAACCAG
GCCGCTGCCG CACGCAACGG GCTGTCCGTC AATCAACTGG AAGACATCCT GCGCGCCCAG
ATCGAAGGCC AACTGGCCGG CATCGTGCAG GAAGGTGTGG CCAGAACGCC GATTCTGATT
CGGGCCGATG CACTGACCGA CGCACCGCAG AAACTGAGCT CTTTACCCAT CGCCCTGCCG
AACGGAACCG TGCAACCGCT CTCGAATCTG GCCATCGTCG AACGTACCAC CGGCCCGGTT
TTCGTTACCC GGGAGATGGG CTCGCGCTTT GCCGTGGTGC GCGCCAATGT CTCCGGGCGC
GCGCTCACCG ACTTCGTTGC CGATGCCAAG AACCAGATTG CCGAGAAGGT GGAGATGCCG
ACAGGCTACC GTCTGGAATG GGGCGGCCAG TTCGAAAACC AGCAACGCGC CGCCGCACGC
CTCGCCATTG TCGTGCCCAT CGCACTGGGG CTGATTTTCG TGTTGCTGTT CACCACCTTC
AATTCCGTTC GTCAGGCCAC GCTGGTGTTT GCCAACATCC CGTTTGCCCT GATCGGCGGT
GTGGTCGCCC TGTATATCAG CGGGGAATAT CTTTCGGTGC CCGCATCGGT CGGGTTTATC
GCCCTGCTGG GCATTGCGGT ATTGAACGGC TTGGTGCTGG TTTCCTATTT CAACCAGCTG
GCCGCACAGG GCCTAGACAT CGAACAGGTG GTTCGACAAG GCGCGCTGCG TCGATTGCGC
CCCGTCATGA TGACAGCTTC CATTGCCGCT TTGGGCTTGG TGCCGCTCTT GTTCGCCACC
GGCCCCGGTT CGGAGATTCA GCGCCCCTTG GCCGTTGTGG TCATCGGTGG GCTGGTGACC
TCTACCCTGC TCACGCTCAT CCTGCTGCCG ATTTTGTATA AACGGTTCGG CCAATCTTCC
GATCAGCGCC GTGCGCAACA ACCATTACCG GAGGCCAAGG CATGA
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| Protein sequence | MLNRLIAFSL AQRLMVLLAA ILVAGFGWMA FSTIPIDAYP DISPTQVQII LKAPGVTPTE
VETRITAPLE TSLLGIPNQT MLRSTSKYGI SVITLDFAEG TDIYWARQQV NEALSSARGD
LPAGTTGGVA PITTPLGEAF MFTLQSPTLS LTERRHLLDW VIRPALRAVK GVADVNSLGG
FVRTFEVIPN PTQLAAQKLT TDDLMRVIEQ NNRNDGAGRL DVGEEAWLVR SEGRIKTLDD
LGNLVIAQHN GQPIHVRDVA TVRIGAITRL GAVTHSGKGE TVEGLVLTLR GANARAVVAG
VEQRLAEIKP SLPPDLKINV FYNRADLVNA AVHTVSKALL EAVVLVLILL ILFLGNLRAA
VTVALTLPMA ALITFILMKQ FGMSANLMSL GGLAIAIGML VDAAVVVVEN TVAHLAEAHK
HPNLPRLHIV YRSVREVAAP VFSGILIIML VFLPLLSLQG LEGKLFSPVA LTIIFALGAS
LVLSLTLIPV IASLILGKVT DHEPWLVRQL HRIYEPALNF ALKRPLPVVA VAIAGLVVAG
LLYTQIGKTF MPSLDEGTIV MQVENLPSTN LGTTIALNTN IQKTLMAKVP EIAQIVGRSG
SDELGLDPMG LNDTDTFIIL KPKDQWQASS IDEVREKIRA VISTLPGFNF SFTQPIEMRV
SEMLTGSRGD LAIKIFGSDL TEINTLSNEI KSVVSAIPGA QDVATTDNEG LLYLNIAVNQ
AAAARNGLSV NQLEDILRAQ IEGQLAGIVQ EGVARTPILI RADALTDAPQ KLSSLPIALP
NGTVQPLSNL AIVERTTGPV FVTREMGSRF AVVRANVSGR ALTDFVADAK NQIAEKVEMP
TGYRLEWGGQ FENQQRAAAR LAIVVPIALG LIFVLLFTTF NSVRQATLVF ANIPFALIGG
VVALYISGEY LSVPASVGFI ALLGIAVLNG LVLVSYFNQL AAQGLDIEQV VRQGALRRLR
PVMMTASIAA LGLVPLLFAT GPGSEIQRPL AVVVIGGLVT STLLTLILLP ILYKRFGQSS
DQRRAQQPLP EAKA
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