Gene Hneap_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0193 
Symbol 
ID8533308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp196011 
End bp197153 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content57% 
IMG OID646382571 
Producthypothetical protein 
Protein accessionYP_003262103 
Protein GI261854820 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACA CGCCGACTCA ACCAACCCAA ACCAACCGAT TGTTATATCT GGACTTTCTA 
AGGGGACTGA TGTTGATCGG CATCACGCTT GGGCATTTTG GGCCCACCTT CGAATGGCTG
ATGTGGCAAC CACTGGGATT TTTCAGCAAT GCCGAGGGCT TTGTTTTGCT TTCCGGCACC
GTTTTCGGGC TGGTCTACGC CAAACTCGAG CAACGCGACC CCGCCTCAAT GGCCGTCAAG
GCGCGCAAAC GGGCTTGGCT CATCTACCTC AGTCACCTGG GTTTGTTGCT GTTCGTTGCA
CTCTACACTT GGGCCACTAA CGGCTGGGCA GATGACTGGC GTAGCCACGC ACAATTCATC
GCCGAGGCGC CCGCGTTGGG GCTGATACTC GGCACGTTGC TCATCTACCA ACCGCCGCTG
CTCGATATCC TGCCGATGTA CGCGCTGTTT GTGCTTATCG CGCCGGGGAT CATCCGTCAA
TTAGTCGCCG GGCGCGTTTG GCTGGTATTG GGTGTCAGTC TGGTTATCTG GTGGTTGTTC
TCGCAGGTAG TCGGTGGTGG GCATTGGCGT ACGACCATCG CTGACTCTTT GGGCATGGGC
TTTCCCTTTC AGGTCGGTGA ATTCGATCCG CTGACTTGGC AGGTTTTGTT TTTCTTTGGT
ACCGCACTGG GCGTTCTCAT GTTCCAGCGA CGCCTGCCTC GGCAACCGCA GATCGTGCTC
GCACTCATCG CCATGGTCGC GGTGGTTTTG TTTTTTGGGC TTCGCCATGA GCTGATTGCC
ATGCCCGCCT TTTGGAACCC CGCCTGGGTG GATCGGCACG AACTGGCCTG GCTGCGGCTG
GTCAATATCG CCGCGCTGAT CTACACATTC TGGACGCTGC TGTATCTGGC GCGCAAGGTG
AATTGGCCCG CCTGGGCACG GGCACTACCG AAACCGTTTG CCTGCCTTGG GCGCCATAGT
TTGGCGGTAT TCAGCGTGCA TGTGGTGCTC ATTTATCTCA CCATTCCAAT CCAGATGACC
TACCCGCTGT TCTGGCGTTA TGTGATCGGT TTGAGCCTGA TATTGATCCT GTTGGCGCTG
GCTTGCGGCC TGGATATTCG TGCCAAACGG CAGCGGCAGA CGCAGCTCAT TCCTGTTCGG
TGA
 
Protein sequence
MSHTPTQPTQ TNRLLYLDFL RGLMLIGITL GHFGPTFEWL MWQPLGFFSN AEGFVLLSGT 
VFGLVYAKLE QRDPASMAVK ARKRAWLIYL SHLGLLLFVA LYTWATNGWA DDWRSHAQFI
AEAPALGLIL GTLLIYQPPL LDILPMYALF VLIAPGIIRQ LVAGRVWLVL GVSLVIWWLF
SQVVGGGHWR TTIADSLGMG FPFQVGEFDP LTWQVLFFFG TALGVLMFQR RLPRQPQIVL
ALIAMVAVVL FFGLRHELIA MPAFWNPAWV DRHELAWLRL VNIAALIYTF WTLLYLARKV
NWPAWARALP KPFACLGRHS LAVFSVHVVL IYLTIPIQMT YPLFWRYVIG LSLILILLAL
ACGLDIRAKR QRQTQLIPVR