| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0192 |
|---|
| Symbol | |
|---|
| ID | 8533307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 194496 |
|---|
| End bp | 195998 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646382570 |
|---|
| Product | protein of unknown function UPF0061 |
|---|
| Protein accession | YP_003262102 |
|---|
| Protein GI | 261854819 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.212573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTA CTTCCAAGCA GGACGATTCA AACTGGTATC TAGAGCAGAC GTTGGCCTAT
GCCGTTGCTG ACTTGTGTCT GCCCGCTCAA GCAGATCGGG TGCCGAATCC GCGAATGATC
GCCTGGAACG AATCACTGGC GGCCGAGATG GCACTTGATT TGCCCAGCGA AGAGACCAGG
GCACAGATTT TTTCGGGAAA CATCATACCC TCAGGCGCAG CGCCATCGGC CCAAGCCTAC
GCCGGGCATC AGTTCGGCAA TTTTGTGCCG TTGCTGGGCG ATGGTCGGGC TTTGCTGCTG
GGGGAAGTGA TCGATCGCCA CGGAAAACGG CGCGATATTC AGCTCAAAGG CGCGGGGCGC
ACGCCGTTCT CGCGCGGCGG CGATGGCAAG GCGGCGCTTG GCCCGGTGCT GCGAGAATAT
CTGGTCAGCG AAGCCATGCA TGCCTTAGGC ATTCCGACGA CACGCGGCTT GGCGGCGGTG
ACCACCGGAG AGACGCTGTG GCGCAAGGGC GAGGTGCCGG GTGCCATCCT CACAAGGGTG
GCGGCAAGCC ATATTCGGGT GGGCACCTTC GAGTTTCTCG CCGCGCGCGG TGGGGATGCC
GTTCGGTTAA AGCAGCTCGC CGATTACGTC ATCCATCGTC ATTATCCTAC CTTGAAGGAC
AGCGCCTTGC CCTATAGTGC GCTGCTCGAA GCGGTGGTCG ATGCGCAGGC AAATCTAGTG
GCGCGCTGGA TGTCGGTCGG GTTCGTGCAT GGCGTTATGA ATACCGATAA CACGAGCATC
GCGGGCGAAA CCATCGATTA CGGCCCCTGC GCGTTCATGG AGGCCTATCA CCCGAAAACG
GTTTTCAGCT CGATTGATCT GCAAGGGCGT TATGCCTACG GCAATCAACC GAATATCGCG
CGCTGGAATC TGGCGCGCTT TGCGGAAAGC CTGCTGCCCT TGATCGATAC GGATGGGGAC
GCAGCGATCG CTCAGGCCAA TGCCGTGCTG GCTGATTTCC CCGGGCGTTA TTCCCAGCAT
TGGTTGGCGG CCATGCGCCC CAAGCTCGGT TTGAGTAGCG ATACGGGCGT GAGCGATAGC
GCCGATACGG AGCTGATTCA CTGGTTCCTG GCGGCCATGC AGTCCGAAAG GGTCGATTTC
ACGAAAGGTT TCAGGCAACT ATCGACGGTG GTGCGCGGTA ATGTAGAACC GCTGCGCTCG
CTGTTCAATG GCTCGGCAGA TTTTGCCGAC TGGCTTGAGC ACTGGAATAC GCGTATAGCG
CAGGAAAAAG GCACGGCCGA TGAGCGTGCC GAACGCATGG ATGCCGTGAA CCCGGTGATC
ATTCCGCGCA ATCATCAGGT AGAAGCGATG ATTGAAGCCG CGGTGCGTGA GGGTGATTTT
TCGCCTTTTC ACGCGTTGCT CGCGGCGGTC ACGCATCCGT TTGAAGATCG CCCCGAGTGG
CAGAACTATT GCGAACCGGC ACCCGCGTCG TTTGGACCGT TCACCACATT TTGCGGCACC
TGA
|
|---|
| Protein sequence | MSFTSKQDDS NWYLEQTLAY AVADLCLPAQ ADRVPNPRMI AWNESLAAEM ALDLPSEETR
AQIFSGNIIP SGAAPSAQAY AGHQFGNFVP LLGDGRALLL GEVIDRHGKR RDIQLKGAGR
TPFSRGGDGK AALGPVLREY LVSEAMHALG IPTTRGLAAV TTGETLWRKG EVPGAILTRV
AASHIRVGTF EFLAARGGDA VRLKQLADYV IHRHYPTLKD SALPYSALLE AVVDAQANLV
ARWMSVGFVH GVMNTDNTSI AGETIDYGPC AFMEAYHPKT VFSSIDLQGR YAYGNQPNIA
RWNLARFAES LLPLIDTDGD AAIAQANAVL ADFPGRYSQH WLAAMRPKLG LSSDTGVSDS
ADTELIHWFL AAMQSERVDF TKGFRQLSTV VRGNVEPLRS LFNGSADFAD WLEHWNTRIA
QEKGTADERA ERMDAVNPVI IPRNHQVEAM IEAAVREGDF SPFHALLAAV THPFEDRPEW
QNYCEPAPAS FGPFTTFCGT
|
|---|
| |