Gene Hneap_0188 details

Gene Information

• Locus tag: Hneap_0188
• ID: 8533303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 189700
• End bp: 191658
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 646382566
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_003262098
• Protein GI: 261854815

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.489621
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTCAT CAACGGCCAA TATATTCGGG CTGCACGACG TGCTTGTGTG GTTGTCGCAG 
CGCCCGCTTG TGATGCCGCA CTTGGCCGAA CCGCTGTGGC TTGGCCTACT GCTGGTGCCC 
TTGGCGCTAT TCATCTGGCG CTGGCGCGCG CGGCAAAAAA TACTCAACTA TGCCGATGAA 
TCCTTGCAAC ACTGGGCGAT GCAGCGCGCG TCGCAAGCGT CAACCACTTG GGCTGGTCGC 
CTTCGAGGTC GATTGATCCC GTCTTTTTGG CTGCTGTTCT GGTTCTCGCT GGCGCTCACA 
CTGGCCGGGC CTCAGGTGAT GAAAGCCAAG AATGAACAGT TGGCGACACG GCCACCGGTG 
CTGTTTGTGG TGGATGACAC TGCTGCCATG AGCGTGGCGG ATGTCAGCCC GAATCGTCAA 
TCACGCGCTA CCGCCCTGCT GGAATTACTT GGGCAAGCGC TCAACACGCA TCGCTTGGGC 
TTGATGATCG ATAACGGCGA GGCAGGATTG CTGCTGCCGC CCACGGGCGA TGCGAATCTG 
TTCGCGTTTT ATCTCAAGCA ATTAGCGCAC TTGGCCCATC CTTTGGCCGT GCCGCATCCC 
GATCGTGCGT TTGACTGGAT TGCCCAGATG CCTGACATGC GCGGCGGTGT GGTTGTTTGG 
TTGACCAGTG GCGATGCCAA CAGTTTTCAA GGCGCCTTGG GTAGCCGTGA ACTGGCCGCC 
GCACAGGCAT TAAACAAAGC CGACGTGCGC TTGATTGCCG TAACGGTCGC CGGAGCCGGT 
GGGCCACTGC TTAAAGATGG CTTGCCCTTG AAAAACACCC AAGATCAGGT GATTACAAGC 
CAGCCCGCGC CGCAACGGGT GGCGGAGTTG GCGAAGCTGA CCGGCGGCGC GGCCACGCAA 
ACCCATACAT TACCGCAGGA TGTGGCGTTT ATCCGTCAAG CGGTTAGCGC CGTGCCCAAC 
CGCGCCCCGG ATAAAAACTC AGCCAAGGCG CAGCGCTCCT TGCATGAGCT GCCCTTGATG 
CTGGCTTGGT TGAGTTTGCT GGCTCTGGCT GCACTATCGC TTGGGCTCAA GCCGCTGAAC 
GGGTTTGTGG CTCGGCTGCT TCGGCCAAAT AAGACAAAAC CCCCGATCGC TGCTTTCCTT 
TTAGTGGCAA TCCACGGTGC GCTGATGTCT GCACTCGTTG CCGGGTTATC GTTCGCACCG 
AGCGGCGCTT GGGCTGCCGA TAAACCCAAT CATACTGCCG CAACCTTTAT GAGTCGTTCA 
GCCGATGATG CAGAAGTGGC TGCCGGTAAT CGTGCGCTCA AAGCGGGCTC ATACGCCCAA 
GCACAAGTCG CCTTCTCGGC CGCCAAAGGC TACGCCGCGC GTTTCGGTGC GGGCTTGGCC 
GCGTTTCGAC GAGCCGATTA CGCGTTTGCG GTCGATCAAT TACAGATGGC CGTTACCTTG 
GCGCACACGC CAACACAAAA AGCACAGGCC GCGTTCAATC TCGGCGATGC GCTCACTCTC 
GCGGGGCGCT ATGCCGAGGC CCGCGACGCG TTTACCTATG TGCTATCCAT CAAGCCGCCT 
GATGAAACCC TTACAGCCGC CGCACTGACC AATCGCGGCA TTGTGCAAAA AATGCTGCAA 
TCCTTTGCGA AAAATGGCAA AAACAGCACG CGTTTCCAGG GTCATCAAGC GGCAAAATAC 
GGTTATTTCA AGGATCCGGA AAAAAGCCGA ATGGATAAAG AAATTCAAAA ATCCCAGGGC 
GCGAGCGCGG GCTCGTCACA AGCATCGACA ACCGCAACCC AGCCCACCAC GCCGTTTGCC 
CTGAATGCGG CGACCGAGAG CAGCGCCCGC TCCAAATTGA CTTTGATTCA TGATGCGCCC 
GCCCCGTTGC TCGATGGCCT ATTGCGCCAG CAGCCGTACC ATCTGCCGAC CCTCACCGCG 
CCGGGCAAAA ATCAGGCAAT GCCAGCAGGT GCGCCATGA 

 

Protein sequence

MLSSTANIFG LHDVLVWLSQ RPLVMPHLAE PLWLGLLLVP LALFIWRWRA RQKILNYADE 
SLQHWAMQRA SQASTTWAGR LRGRLIPSFW LLFWFSLALT LAGPQVMKAK NEQLATRPPV 
LFVVDDTAAM SVADVSPNRQ SRATALLELL GQALNTHRLG LMIDNGEAGL LLPPTGDANL 
FAFYLKQLAH LAHPLAVPHP DRAFDWIAQM PDMRGGVVVW LTSGDANSFQ GALGSRELAA 
AQALNKADVR LIAVTVAGAG GPLLKDGLPL KNTQDQVITS QPAPQRVAEL AKLTGGAATQ 
THTLPQDVAF IRQAVSAVPN RAPDKNSAKA QRSLHELPLM LAWLSLLALA ALSLGLKPLN 
GFVARLLRPN KTKPPIAAFL LVAIHGALMS ALVAGLSFAP SGAWAADKPN HTAATFMSRS 
ADDAEVAAGN RALKAGSYAQ AQVAFSAAKG YAARFGAGLA AFRRADYAFA VDQLQMAVTL 
AHTPTQKAQA AFNLGDALTL AGRYAEARDA FTYVLSIKPP DETLTAAALT NRGIVQKMLQ 
SFAKNGKNST RFQGHQAAKY GYFKDPEKSR MDKEIQKSQG ASAGSSQAST TATQPTTPFA 
LNAATESSAR SKLTLIHDAP APLLDGLLRQ QPYHLPTLTA PGKNQAMPAG AP