| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0172 |
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| Symbol | |
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| ID | 8533287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 174963 |
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| End bp | 175553 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646382550 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003262082 |
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| Protein GI | 261854799 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.262176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGGCCCAT CATCCTTTTT TTCTGGCTCA TTTCTATTCG GGCGATTGAC CTTCAATCAT
CGCCTTGAGC AACTACGCCC TCGGCTGTAC CGCTTGGCCT TTTCGTGGTG CAAGGAGTCT
TATCTGGCAG AAGACCTGGT TCAGGAAGCC ATGATTCGTG CACTGCAAAA ACAGGCGCAG
CTCAGGGATG AAGAACTTCT GGATCGCTGG GTTATCCGCA TATTGGCCAA TCAGTGGATG
GATCATGTCC GCAGTCATGT TCGCGACGAG AACATTGACG ACATGGAGCA AACGATCTCA
ACCGACGAGC ATCAATCGCC AGACAGCGTG CATGGCCGGG ATGAAATGAT CGAACGCGTC
CGTAGCGCCG TGATGCGCTT GCCGGAAATG CAGCGGATTG TGGTCACGCT GGTCGATCTG
GAAGAATTCT CCTATAAGGA AGTCGCCACC ACACTCGACC TGCCGATCGG CACGATCATG
AGCCGTCTAT CGCGTGGCCG CCAGTCTTTA CGAAATCTCC TGATCGAAAC GAAAAATGCC
GCAACTGAGG AGCGCCGCAA AAGCGAGTGC CACCTGAGGA GAGTTGTATG A
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| Protein sequence | MGPSSFFSGS FLFGRLTFNH RLEQLRPRLY RLAFSWCKES YLAEDLVQEA MIRALQKQAQ
LRDEELLDRW VIRILANQWM DHVRSHVRDE NIDDMEQTIS TDEHQSPDSV HGRDEMIERV
RSAVMRLPEM QRIVVTLVDL EEFSYKEVAT TLDLPIGTIM SRLSRGRQSL RNLLIETKNA
ATEERRKSEC HLRRVV
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