| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0161 |
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| Symbol | |
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| ID | 8533275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 159531 |
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| End bp | 163034 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646382539 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_003262072 |
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| Protein GI | 261854789 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGA CGCGGCTGTA TCTGGCTGGA TTCAAATCCT TTGCCGCGCC GACAGAAATC
TTGCTGCCGG CCGAGCGGGT CGCGATTGTC GGCCCGAACG GTTGCGGCAA ATCCAATCTC
ATCGATGCCA TTCGCTGGGT GCTGGGCGAG TCTTCCGCCA AGCAGCTGCG TGGCCAATCG
CTTGACGATG TGATCTTCGC CGGTAGCGGC CAGCGTCCCG CGGCGAGCCA GGCCGTGGTT
GAGTTGTCGT TCGACAACAG TGCGCGCCGC CTATCCGGGC CGTTCGGTGC TTATGATCAA
ATCGTGATCT GCCGCAGTCT TGGGCGGGAT GGGCAATCGC GCTACAGCAT CAATCAAACC
CGCGTTCGCC GCCGCGATGT GGTGGATCTG TTTTTGGGCA CCGGCGTCGG GGCGCGCTCG
TATTCTGTGA TCGAGCAGGG CCAGATCAAT CGGGTTGTCG ATGCCAAGCC GGAAGATTTG
CGTGCCTATC TTGAAGAGAC GGCCGGCATT TCGCTTTATC GGGAACGCCG TCGCGAAACC
GAAAGTCGCA TTCAGCAAAC TCAGGACAAT CTCAGCCGCT TAAGCGATAT TGCCGACGAG
CTGGGTCGTC AGAAAACCCA GTTGGAGCGG CAGGCGCGAA CAGCCGAACG TTATCGGGAA
TTGCAAAAAA AACGGCGCCG TCAAGTTGTC GAACAAGCTG CGGTACAGGT TGTGCTGACC
GAACGCGCCA ACGCGGCGTT GGATGCCGAG TGGCAAACCG CCCAGGCACA CATGACGACG
GTGGCCGAAC GCATGGCACA AGTTGAATTG CGTTGCGCGC AGGAGGATGA GGCGCGAACG
TCGGCCCAGA GCGATCTTCA ACAGGTTCAG GCCCGGCAAT ATCAACTGGG GGCCGAGCAA
GCTCAGTTGC AGGGGCGTCT GGGCGAACTG GCCGCCCGAA TCGAATCGGC TGAACAACAG
CGCCAGGATG ATCTTGCCCA GCGAACGCGG TTGGAAGCCG CCTGCACGAG GTTACAGGCT
GAACTGTCCC GTCTCGCCGA AGAGCGGCGC ACGCTCGAAT CACAGCGTCA GCAAGCCGCG
GAGCAACGTG CTAAAGCACA GGCCGAGTTG CGGGCTGCGG ATACTCATTT GAACGAAATG
CGGGCCGAGT GGGCGCGTTC GCACGACGAT CTGGCGCGGC CACAGCAGGA TTTGGCCGCG
GCAAAGGCGG AGCACGCCGC GTTGCTGCGG CAGTTGCAAC GGCTTGAGAC CGAGCGGGCG
AGTGTGACTT CGAGAGACTT TACCGAGCCG ATGGCCGCCT CGATTCAACA GATTCAGGAT
GCCGAAACCC GTATGGGTGC GCTGGAACAG TCGCATTCCG CTGGCGAGGT CGTGTTGGCT
GAGCAGCAAA CGGTTCTGGC TGAACTATCG GATCGCGCCG CCGCTATGCA AAAAGAGGCG
CAGACTCTGC GGCAGAATGC CGATGCGTTA CAGGCCGAAC GTCGTGGCCT TGAGCGGGCT
CTGGCAGCCC ACCAAACATC GAAAGACGAT GCGCCCAGAG CCGAGCGACT CATTCAGCGT
CTCGCTAAAG CACATGCCGA TGCCTGGTGG GGCCATGCGC TTGGTGCGGG TATCGAAGCG
GCTTGCGTGG ATGATCTGGA TGCACTGATG GTGGCTTGGC GTGCCGATCA GATACCCGCA
ACGGGTTGGT GGGTAGCACC GGATTCGCAG CGGTCCGAGC CAAAGTCCGA CCTTGAACAG
AAGCGCAGTC CAAGTGACGC GCTGGCGCCC TGGCTTCGCG ATTGGCAGCA CACGCGCCAC
CCGGCACCGT CTTTGAACGA GGCATTGGCT CAGCGCCACA CCCTGCCATC CGGTCATTGT
TTCGTCCTGG CCGATGGCTG GCAGGTCGGG CGGCACTGGA TTGGGCGCGG TGGAAGTGAT
CAGGCCGCCG TGCGGCTCGC GCAACAAACG CGTCTGGCCG AATTGCAGCA GGCTGGAACT
GAAGCCGAAA CCACTGCGGA ACAGGCACAG ATTGAATACC AGCGGATACA AAATCAGCTG
GCTCAGCAGC GCAAGCAGGT CGAGCGACTG GTGGCCGAGC AACACCAGTT CGAACAGCAG
CGTCAGCGCC TGCACTGGTC GCTTGAGGAT TTGCGTCGCA AATACCAACA ACTTAAACAG
CAACAGGCGG ATCGAGCGGC AAATGTTGCG CGAATGGAGG CTGAGCACAA GCAGTTGAGT
GCAGATAGGG GGCAACTGGA GGATACAATC CGCCGTCTTG AACAGATCGT GGCACAGGCC
CGCTCCGCGC GCGATGCGTT CAATGCGCGC CAGCAAACGG CAGAGCAGAC CGTGCAGGTA
TTGCGTCGCC AGGCCGGTGA AGCGGGGCAG GCGCTCCAGC AGTTGGAGCG GACGGTCGAT
CGTAACCAGC ACCAGTTTGA GCAGGCGCAG CAATCGTTGG CGCGCGACGA GGCGCAAATG
GTGCAAATTG ACCAGCGGTT GGCGCAATTT GCGGATCGAT TGGACGGATT GATTACGCAG
CAAAGCGAAC GGCAGGCCGA GTTCACCGCG CTCAGTGCCC GTCAGCATGA AATTGCGCAG
GCGGAAAAAG CGGCGTTGGC ACTCGTTCAT GAGCACACGC AGGCCGTTCA GACCGCAGGT
GTCGAGCGGC ATGAGACGCA GGTCGCCCTT GAAAAGGCAC GCGCGGCGGT TCAGGCGCTG
GAGTTGCAGC GGGCGCAATT GGCGGTGCGC GAGGATCACG CGGGCGAGGC GTTGACACTG
GCACTCGATC AATGGCGAGA CGATCAGCAA TCACTGGATG CCGAAGCCAT CAAACGGCTC
GCGGACATCC CGAATATCGC CGAGGCGCAG GCAGCCGAGC TGTCAACGCT GGAACAGCAG
ATTGCCCGTC TGGGCGCGGT GAACCTCACC GCCATCGAAG CGTTTGCCGA AGCCGAAGCA
CGCAAGTCCG AACTGGATGG ACAGATTGAA GACGTTCAGG CAGCGCTTGA TCAATTACAG
GAAGCCATCC GGACGCTGGA TAAGCAGACG CGCGCGCAAT TCAGATCGGT ATTCGATGCG
GTGAATGCGC GCATCGGCCC CTTGTTCGTG CAGTTGTTCG GTGGCGGCGA GGCTCGGCTG
GAATTGAGCG GTGCGGATGA TCTGGATGCA GGCGTTCTGT TATTCGCCAA ACCGCCGGGT
AAGAAAGTCA CCCAATTATC GTTATTATCC GGTGGCGAGC GGGCGCTGAC CGCAGTGGCG
TTGATTTTCG CTTTGTTCGA GCTCAACCCC GCGCCTTTCT GTATTCTGGA CGAGGTGGAT
GCCCCGCTGG ATGAGGCCAA CGTCGGCCGA TTCTGTGCTA TGGTTTCGGC CATGTCGGAT
CGGGTGCAAT TCCTGTTCGT GACGCACAAT AAAACCACGA TGGCCAGCGC CTCGGCTTTG
GTCGGGGTGA CAATGCGTGA AGCGGGTGTT TCACGGATCG TCTCGGTGGA TGTGGATCGC
GCCGTGCAAC TATTAGAGTC ATAA
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| Protein sequence | MRLTRLYLAG FKSFAAPTEI LLPAERVAIV GPNGCGKSNL IDAIRWVLGE SSAKQLRGQS
LDDVIFAGSG QRPAASQAVV ELSFDNSARR LSGPFGAYDQ IVICRSLGRD GQSRYSINQT
RVRRRDVVDL FLGTGVGARS YSVIEQGQIN RVVDAKPEDL RAYLEETAGI SLYRERRRET
ESRIQQTQDN LSRLSDIADE LGRQKTQLER QARTAERYRE LQKKRRRQVV EQAAVQVVLT
ERANAALDAE WQTAQAHMTT VAERMAQVEL RCAQEDEART SAQSDLQQVQ ARQYQLGAEQ
AQLQGRLGEL AARIESAEQQ RQDDLAQRTR LEAACTRLQA ELSRLAEERR TLESQRQQAA
EQRAKAQAEL RAADTHLNEM RAEWARSHDD LARPQQDLAA AKAEHAALLR QLQRLETERA
SVTSRDFTEP MAASIQQIQD AETRMGALEQ SHSAGEVVLA EQQTVLAELS DRAAAMQKEA
QTLRQNADAL QAERRGLERA LAAHQTSKDD APRAERLIQR LAKAHADAWW GHALGAGIEA
ACVDDLDALM VAWRADQIPA TGWWVAPDSQ RSEPKSDLEQ KRSPSDALAP WLRDWQHTRH
PAPSLNEALA QRHTLPSGHC FVLADGWQVG RHWIGRGGSD QAAVRLAQQT RLAELQQAGT
EAETTAEQAQ IEYQRIQNQL AQQRKQVERL VAEQHQFEQQ RQRLHWSLED LRRKYQQLKQ
QQADRAANVA RMEAEHKQLS ADRGQLEDTI RRLEQIVAQA RSARDAFNAR QQTAEQTVQV
LRRQAGEAGQ ALQQLERTVD RNQHQFEQAQ QSLARDEAQM VQIDQRLAQF ADRLDGLITQ
QSERQAEFTA LSARQHEIAQ AEKAALALVH EHTQAVQTAG VERHETQVAL EKARAAVQAL
ELQRAQLAVR EDHAGEALTL ALDQWRDDQQ SLDAEAIKRL ADIPNIAEAQ AAELSTLEQQ
IARLGAVNLT AIEAFAEAEA RKSELDGQIE DVQAALDQLQ EAIRTLDKQT RAQFRSVFDA
VNARIGPLFV QLFGGGEARL ELSGADDLDA GVLLFAKPPG KKVTQLSLLS GGERALTAVA
LIFALFELNP APFCILDEVD APLDEANVGR FCAMVSAMSD RVQFLFVTHN KTTMASASAL
VGVTMREAGV SRIVSVDVDR AVQLLES
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