| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0147 |
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| Symbol | |
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| ID | 8533261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 142542 |
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| End bp | 143303 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646382525 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_003262058 |
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| Protein GI | 261854775 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTC ACGATTCGCT TATTCAGGGC GTGGGTTCGA CTCGATGCTC AATAAAAAGA
GCGGCGAGCG GTTTTACCCT GCTGGAATTG CTGGTGGCGA TTGCCATCTT CGCGCTGGTG
GCGGTGATGG CCTATGGCGG GCTGAATACC GTGATCAAGC AAAGCGCGAT TGTCGAGGAT
CAAATGGGCC AGTTGAACGC GATGCAAAAT GGCTTGCGGC AAATGCGCGG CGATTTGACC
TTCGCGGTGG ATCGTTTTGC CCGTGATGCC TTGGGTGGCG ATGTACCCGA GTTCGCAGGC
GGCGGCTTGA ACCTTCTGAC ACTGACCCGT TTGGGCGCAT CGAATCCTTG GGCGGCAGCC
GAGCCGCAAC TGGCGCTGGT GCGCTGGCGG CTTGAAAACG GCAATTTGGA GCGCGCAACC
TTCGTGCCGC CCGATGGCGC GGTGGGCAAC AGCGCCGAGC AGCCAGACTG GCGCATCATT
TTGCGCAACG TCAGCAAAAT TCAGCTGACT TTTTACGATC AAAACAACCA GTCGATGCTC
GATTGGCCGC CCATCAACCA ACCCTCGGCG GGCTTGCCCA AGGCGGTCGA AGTGCTGCTG
ACGGTAAACA ACCTTCCCCC CTTGCGCATG ACCGTCGCTA TGGTTTCGGA TTGGCCCGAG
GCCGCTCCTG CCAACCCGCC GGGCGGAACA AATAACGGTG CCGAGCCAGC GACAAGCCCG
CAAACTCAAA CCCAAACTGA GGTGGAGGCG GAGCGACGAT GA
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| Protein sequence | MSVHDSLIQG VGSTRCSIKR AASGFTLLEL LVAIAIFALV AVMAYGGLNT VIKQSAIVED
QMGQLNAMQN GLRQMRGDLT FAVDRFARDA LGGDVPEFAG GGLNLLTLTR LGASNPWAAA
EPQLALVRWR LENGNLERAT FVPPDGAVGN SAEQPDWRII LRNVSKIQLT FYDQNNQSML
DWPPINQPSA GLPKAVEVLL TVNNLPPLRM TVAMVSDWPE AAPANPPGGT NNGAEPATSP
QTQTQTEVEA ERR
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