Gene Hneap_0144 details

Gene Information

• Locus tag: Hneap_0144
• ID: 8533258
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 141003
• End bp: 141503
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 646382522
• Product: general secretion pathway protein G
• Protein accession: YP_003262055
• Protein GI: 261854772
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGTCTT ATTTTTCCTC ACGTCTTTCT TCACAGGCGG CGCGTATTGA GCGTGGCAAT 
GGGTTGATTT CCCGTGGTTT TACCCTGATC GAAGTGATGG TCGTCGTGGT TATTCTGGCC 
ATTTTGGCGA CCATCGTCGT GCCGAAAATC ATGGATCGGC CAGACGATGC CCGTATCGCC 
AAGGCCAAGC AGGACATTCG GGCCATCGAC TCGGCACTGC AACTCTACAA GCTCGACAAC 
CTGACCTACC CGACCACCGA TCAGGGGTTA GAAGCGCTGG TCAAACCCCC GGCCAATGCC 
AAAAACTGGC GCCAAGGCGG TTACCTCGAT CGCTTGCCGA TCGACCCGTG GAACAATCCT 
TATCAATACC TGAGCCCCGG CCAGCACGGC GCATTTGATG TCTACAGTCT CGGCGCGGAT 
GGTCAACCGG GCGGCACCGG TGCGGATGCT GATATCGGCA ATTGGCAGGA AGAAGGCGGT 
GCCACGAACA CGGGTAACTG A 

 

Protein sequence

MMSYFSSRLS SQAARIERGN GLISRGFTLI EVMVVVVILA ILATIVVPKI MDRPDDARIA 
KAKQDIRAID SALQLYKLDN LTYPTTDQGL EALVKPPANA KNWRQGGYLD RLPIDPWNNP 
YQYLSPGQHG AFDVYSLGAD GQPGGTGADA DIGNWQEEGG ATNTGN