| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0143 |
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| Symbol | |
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| ID | 8533257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 139777 |
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| End bp | 141000 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646382521 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_003262054 |
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| Protein GI | 261854771 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTT TTGAATACAG CGCGCTGGAT GCCCAAGGCA AAACCCGCAA GGGCGTGATT
GAAAGCGACA GCGCGCGCGG TGCCCGCAGC CTGTTGCGCG ATCAGGGCTT GGCGCCGCTG
ACCATTGAAG CGGTAGTGGC CGATCAATCC ACCGCTGGCG GCATGCAAGG CTGGATGAGC
CGTTTTCAAT CCTTGAATCC AACGGAACTG GCTCTGTTCA CCCGCCAGAT TTCCACCTTG
ATTGCCGCCG GCCTGCCCAT CGATGCGGCG CTGTCGGGGA TTATTCGGCA AACGGAAAAC
CCAAGAATCC GCCGCATTGT CACGGCGGTG CGCTCAAAAG TGGTTGAAGG GCACAGCCTT
GCGCAGGGGC TGGCGACGTT TCCGCGCGCC TTCTCGGAAC TGTACCGCGC GACGGTTGCC
GCCGGTGAAG AATCGGGCCA TCTCGAAGCG GTGCTCGAAC GCCTGGCCGA TTACACCGAA
GGGCGTCAGG CCACCACGCA AAAGGTGCAG ATGGCGCTGT TTTATCCCGC ATTGCTCACC
TTGATGGCCG TGGCGGTAGT TATTGGCCTC GTGACGTATG TTGTGCCGCA AGTGGTGCAA
GTCTTCGTGC AGATGAAACA AACGCTGCCA CCGCTGACCC GCGGATTGAT TGCGGTGAGC
GCCTTTTTGC GAGAACAATG GCCGTGGATT TTATTGGGTA TGGCGGCCTT TGCTATTTGG
TTTTACTGGG CGCTGCGCCA ACCAAAATTC GCTTTTCGTT GGGCGCAGAT TCAACTTAAA
TTGCCGCTGA TCGGTCGATT GATTCGTGGC TTCAATGCCG CCCGGTTCGC TCGCACGTTG
AGCATCCTGA GCGCCGCCGG CGTGCCGATG CTCAAGGCGC TGACCATCAG TGGCGAGGTG
GTTGCTTCTG AGCCGATGCG CCGCGCTATT AAAGAGGCCA CCGACCGCGT GCGTGAGGGC
GCGCCGATTG CCCGTTCGCT GGAGCAGTCG CGTTTATTTC CGCCGATGAT GTTGCAATTG
ATCGCGGCGG GCGAGCAAAG CGGCGCCTTG GGCAATATGC TCGAACGGGC CGCCGTGCAG
CAGGAGCGTG AACTCGATAC CCTGATCAAC GCCTTGCTCG GCCTGTTCGA GCCGATTTTG
ATTCTCGTCA TGGGCGGGGT CGTTTTGCTG ATCGTGCTGG CGATCCTGAT CCCGATTTTT
GATCTCAACC AAATGGTGCA TTAG
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| Protein sequence | MAAFEYSALD AQGKTRKGVI ESDSARGARS LLRDQGLAPL TIEAVVADQS TAGGMQGWMS
RFQSLNPTEL ALFTRQISTL IAAGLPIDAA LSGIIRQTEN PRIRRIVTAV RSKVVEGHSL
AQGLATFPRA FSELYRATVA AGEESGHLEA VLERLADYTE GRQATTQKVQ MALFYPALLT
LMAVAVVIGL VTYVVPQVVQ VFVQMKQTLP PLTRGLIAVS AFLREQWPWI LLGMAAFAIW
FYWALRQPKF AFRWAQIQLK LPLIGRLIRG FNAARFARTL SILSAAGVPM LKALTISGEV
VASEPMRRAI KEATDRVREG APIARSLEQS RLFPPMMLQL IAAGEQSGAL GNMLERAAVQ
QERELDTLIN ALLGLFEPIL ILVMGGVVLL IVLAILIPIF DLNQMVH
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