| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0125 |
|---|
| Symbol | |
|---|
| ID | 8533239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 117014 |
|---|
| End bp | 117433 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646382503 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_003262036 |
|---|
| Protein GI | 261854753 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.369397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTG TTCGTTATGA GCCTTTTGGT CTGTTGTCCC AGCTGCAGCG TGAACTTGCG
CGCAGTGAGG GTTCCACCGC GACGGCCGAG TGGTCGCCCA GTGTGGACAT CAAGGAAGAA
CCGGATCGCT TCGTGATCCT CGCCGATGTG CCCGGTGTTC AGCCGCAGGA CATTGACGTC
CATATGGAAA ATGGCCAGCT GACCATCAAG GGCGAAAAGA AAACCGAAGC CACCGCGGAA
GACAAGAACT ACAAGCGGAT CGAGCGAACC TATGGTTCCT TCTACCGAAG GTTCGGTCTG
CCCGATTCTG CCGAGGCGGA TAAGATCTCG GCCCGCACGA AGCATGGTGT GCTGGAAATC
GTGATTCCCA AACGCGAATC GGTGCAGCCT CGCAAGATCA ATGTGGTTAG TGAAGACTGA
|
|---|
| Protein sequence | MSIVRYEPFG LLSQLQRELA RSEGSTATAE WSPSVDIKEE PDRFVILADV PGVQPQDIDV
HMENGQLTIK GEKKTEATAE DKNYKRIERT YGSFYRRFGL PDSAEADKIS ARTKHGVLEI
VIPKRESVQP RKINVVSED
|
|---|
| |