Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0121 |
Symbol | |
ID | 8533235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 111734 |
End bp | 112534 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646382499 |
Product | hypothetical protein |
Protein accession | YP_003262032 |
Protein GI | 261854749 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCG AAACCCTCTC TGCAATTGAT CTAGGTCTGG CGGCCCTGCT GGTGGTGGCA TTGGGCGTGG TCCAGTTCTT GATGGGCCTC GGTTTGCAGC GCTCGCTCGT GATCGGGACG GTTCGGATGA CGCTCCAACT GTTATTGGTC GGACTGGTGC TCAAGACCCT GTTTGAATCT GCTCATCTCG TTTGGATCGG GCTGATGGCT CTAGTCATGC TGGCGCTGGC CGGTTACGAA GTGAGCGCGC GCCAGAAACG GCCGATCAAG GGCTGGCGAG GGTACGTTAT TGGCTTGTTA TCGATGGGCG TGACGGCAGC AATCATCACA CTGCTGGCAC TGATCGTCAT CATCTCGCCC CAGCCGTGGT ACACACCGCA GTACGCCATA CCGCTGCTGG GCATGATTCT GGGCAATACA ATGACAGGGA TTGGCCTGGC GTTGAATCAT CTGACACAAA CCGCATGGTC CAACAAGAGT CGAATCGAGG CCCGTCTGCT ACTGGGACAA ACCGCGACAC AGGCCATGGC CGACCTGCGC ACCGAGGCGC TGCGTGCGGG CCTGATTCCC ACCCTGAACA TGCTGGCCGC CGCCGGACTG ATCAGCCTGC CGGGCATGAT GACCGGCCAG ATTCTGGCGG GTGCGCCACC AATGGAAGCA GTGCGTTACC AGATTTTGAT CATGCTGCTG ATCACTGCGG CAACCGGATT CGGTTCGTTG CTGGCCGTGC ATCTCGGCGC CAGGCGACTG TTCGATGATC GCCAGCGCCT GCGGCTTGAA CGGTTGGGGC AGCGTAGCTG A
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Protein sequence | MNIETLSAID LGLAALLVVA LGVVQFLMGL GLQRSLVIGT VRMTLQLLLV GLVLKTLFES AHLVWIGLMA LVMLALAGYE VSARQKRPIK GWRGYVIGLL SMGVTAAIIT LLALIVIISP QPWYTPQYAI PLLGMILGNT MTGIGLALNH LTQTAWSNKS RIEARLLLGQ TATQAMADLR TEALRAGLIP TLNMLAAAGL ISLPGMMTGQ ILAGAPPMEA VRYQILIMLL ITAATGFGSL LAVHLGARRL FDDRQRLRLE RLGQRS
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