| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0119 |
|---|
| Symbol | |
|---|
| ID | 8533233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 109013 |
|---|
| End bp | 110113 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646382497 |
|---|
| Product | Sec-independent protein translocase, TatC subunit |
|---|
| Protein accession | YP_003262030 |
|---|
| Protein GI | 261854747 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC GCGATTCGTC CCCAGAGGCG GACAAAAACG GTCTTGCAGA CGTCGTCGAA
GAAACCGGCA TGGCCGGTTT CCTTGGGCAT CTGGTGGAGC TGCGTAATCG GTTGCTTAAG
GGCGTTCTGG CAGTACTGGT GCTGTTTCTG ATCTTATTTC CGTTTCGCAA TGAACTGTTC
ACCATGCTCG CCGATCCGCT TTCGCGTCAC ATGCCGGCCG GTTCGACGAT GATTGCTGTG
GAAGTGGCGT CCCCGTTCTT CATCCCGTTG AAACTTACCG CCCTGACGGC CGTGTTCATT
GCAATTCCCT TCCTGCTGTA TCAACTCTGG GCGTTTATTG CGCCCGGCCT CTACAAGCAT
GAGCGAAAGT TGGTCGCGCC CCTCGTCTTT TCCAGCACGA TCCTGTTCTA TCTCGGGGCG
GCGTTCGCGT ATTTTGTCGT CTTCCCGGTT GTATTCGGAT TCCTGAGTAC GGCGGGGCCA
AGTGATGTGA ACTTCGCGCC GGATATCGGA GAATACTTAA GTTTTGTCAC CTCATTGTTC
TTTGCCTTCG GATTTGTGTT CGAAGTGCCG GTGGCGATCG TTCTGCTGGT GATCGTGGGT
GTGGTGACGC CGGATAAACT GGCTGGATTC CGCCGTTACG CCATTCTGAT CGCTTTTATC
ATTGCGGCCA TACTTACCCC GCCGGATGTG CTGTCGCAGT TCATGATGGC GTTGCCGATC
ATCATGTTGT ATGAGTTCGG TTTGTTTGTG AGCCGGTTTT TCTATAAGGC CAAACTGGCG
CGCGCTGCCG AGGTTGAGGC GGAAGAATCG GGCGCAGCGG ATGATGAATC CGATGAGGCC
GTCTCCGCGC GCCATGCCGA GTACGAGGCC AAAGCGCAAA CACAGGCTGA CGAACCGCTG
GATATGGATA AGGCCTTTGA TGAAGCGGAA GCCGATCAGC GCCGGCTGGA GTCCGATTCA
TCGGCAAGCG ATGATGGCCC CGAGTCAAAT ACTGCCGGTC GCACAGAAGA GGGCGAGCAG
CCTTCCACGG GCAGCAAGCC AGAGGACGAA CCAAACGCAC CCTCCGAGCC ATCGCCCAAA
AAGCCCGATA GCCCGGTTTA A
|
|---|
| Protein sequence | MTERDSSPEA DKNGLADVVE ETGMAGFLGH LVELRNRLLK GVLAVLVLFL ILFPFRNELF
TMLADPLSRH MPAGSTMIAV EVASPFFIPL KLTALTAVFI AIPFLLYQLW AFIAPGLYKH
ERKLVAPLVF SSTILFYLGA AFAYFVVFPV VFGFLSTAGP SDVNFAPDIG EYLSFVTSLF
FAFGFVFEVP VAIVLLVIVG VVTPDKLAGF RRYAILIAFI IAAILTPPDV LSQFMMALPI
IMLYEFGLFV SRFFYKAKLA RAAEVEAEES GAADDESDEA VSARHAEYEA KAQTQADEPL
DMDKAFDEAE ADQRRLESDS SASDDGPESN TAGRTEEGEQ PSTGSKPEDE PNAPSEPSPK
KPDSPV
|
|---|
| |