| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0073 |
|---|
| Symbol | |
|---|
| ID | 8533186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 79586 |
|---|
| End bp | 80446 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646382452 |
|---|
| Product | glutamate racemase |
|---|
| Protein accession | YP_003261986 |
|---|
| Protein GI | 261854703 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0796] Glutamate racemase |
|---|
| TIGRFAM ID | [TIGR00067] glutamate racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTAA CCGACACCAA GCCCACAGCG CCTATTGGTA TTTTCGATTC GGGTGTGGGC
GGCCTTTCTG TTTATCAGGC CGTTCGCCAT GCGCTCCCTG CCGAAGACAT TATCTACATT
GCCGATTCAG GCTTTGCACC GTATGGGGAT CGCTCATCCG ACTTCATCAC AGAGCGGGCA
GTTGCCATGA CGGATTTTCT TATCGCCGCG GGCGCGAAGG CGGTGGTTGT CGCCTGCAAT
ACGGCGACAG TGATCGCCGT GACGCAATTG CGCAGGCAGT TCTCAATCCC GATCATCGCG
CTGGAACCGG CGATCAAACC CGCGATTGAA CACTCTCAAT CGGGCACCAT CGGCGTGCTC
GCCACGCGCA AAACGATCGA GAGCCCGGCG GTAGAGCGTT TGTGCCGGAC ACACGGGGTC
AACACACGTG TGCTTCTTCA ACCATGCCCC GGGTTTGTGG AGCAGGTCGA GCGCGGCGAA
ATGGATCATC CGGACACAAC CGACCTTATT CGGCGTTATG TCGAACCGCT GCTGGCAGCC
GGCGCAGATA CGCTGGTTTT GGGCTGCACG CACTATGTGT ATCTGGCTCA GCAGATCAGA
ACCATCGTCG GGCCGGATGT GAGCATACTG GATTCGTCGG CCGCTGTAGC CAGACAGGTC
GGGCGGCGCA TCGGCTCATC CGAAGTAGCC GCATCCACGG GGCGATGCGG CCAGGATCAG
TTTTTTACTA CCGCCGCATC GACAGATCAT GCGCGAGCGG TCATGTCTAC ACTTGTTGGG
CGCCCTGTCG AAGTTCACTA TGCCGGAACC ACGCGCCCAG CCTCGACGCT GGAAGCTGAA
ACAGCTCAAA CCAGGGATTG A
|
|---|
| Protein sequence | MKLTDTKPTA PIGIFDSGVG GLSVYQAVRH ALPAEDIIYI ADSGFAPYGD RSSDFITERA
VAMTDFLIAA GAKAVVVACN TATVIAVTQL RRQFSIPIIA LEPAIKPAIE HSQSGTIGVL
ATRKTIESPA VERLCRTHGV NTRVLLQPCP GFVEQVERGE MDHPDTTDLI RRYVEPLLAA
GADTLVLGCT HYVYLAQQIR TIVGPDVSIL DSSAAVARQV GRRIGSSEVA ASTGRCGQDQ
FFTTAASTDH ARAVMSTLVG RPVEVHYAGT TRPASTLEAE TAQTRD
|
|---|
| |