| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0068 |
|---|
| Symbol | |
|---|
| ID | 8533181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 74834 |
|---|
| End bp | 77248 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646382447 |
|---|
| Product | MMPL domain protein |
|---|
| Protein accession | YP_003261981 |
|---|
| Protein GI | 261854698 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4258] Predicted exporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACC AAGGCCTTGA AAAAATGAGC TGGACAGAGC GACGCCTGCC CGTCATCGGC
CTGTGGTTGT TGGCACTGGC CCTGAGCCTC GCTGTCATTC TGCACACTCG CTTCACGGCG
GATATGTCGG CATTCCTGCC CGAACACCCC ACTGCGGCGC AGGCGTTTTT GGTCGATCAA
ATCAAGGATG GTGCCATTTC GCGCATGATC CTCATCGGGA TTGAAGGCGG CGATGCTGCC
ACACGTGCAG ACGCTTCGAA GGCATTGGGT AACGCTCTGC GGCAATCAGG CTTATTCACC
GTGGTGCGCA ACGGCGATGC GCCGACCCGT GACCAAGATA AAACCCTGCT GTTCGATCAT
CGCTACCTTC TAAGCCCGGA CATCACGCCT GAGCGCTTCA CCGTGGCGGG CCTGCACGAA
GCCATCGCCA ATGGCATCGA TTTGCTTGCT TCGCCCTTCG GCATGTTCTC GCAAACGATT
TTTACCCGCG ACCCCACCGC CGAAACCTTT GCCATCGTCG GCAAGCTCGG CCAGAACACG
GGTACGGATG ACGCTCCACG CAACCAAAAC GGCGTGTGGG TGTCACCCGA TGGCAAACGG
TCATTGATGA TGCTGCAAAC CCGAGCGGCC GGGTCCGACA CCGATGCCAT GGCGCGCGCC
ATAGAGGCTG TCCGTGCGGA TTTCTCGAAC GCCGTGAAGG CGCACCCGGA CGGGTCATCG
CTGCGCCTGC TGGTTTCCGG CGCGCCCGTA TTCTCGGTGG ATGCCCGTGC GTTGATCAAA
TCCGATGTGG AACGATTCAG CATCATTGGC AGTGTGGCCG TGATGTTGCT GCTGTTGGTG
GTGTATCGCT CGTTTTCCAT GCTGGTTCTG GGGCTGTTGC CGGTTTTGAC CGGTATTGCG
GTCGCGATTG CCACCGTCAG CCTCGGTTTT GGCACCGTGC ATGGCATCAC CATCGGGTTT
GGCACCACTT TGATTGGGGA AGCCATCGAC TACTCGATCT ATTACTTCAT CCAGACCCAG
AACGCACCGA AAGAGGGTTC AGCATTTCGA TCTGCGGGCC GATCTGAGGG AATGGAACGC
TTCTGGCCGA CCATCCGCTT GGGCGTACTC ACATCAATCA CCGGCTTTGC CGCCTTGTTG
TTTTCGGGCT TCCCCGGCCT AGCGCAAATC GGCCTCTATT CGATTGCCGG TTTGACGACT
GCCGCATTGG TGACACGGTT CGTGCTGCCG CATTTGGGCA CGGCCCGACT CAACCGACAT
TCGCTTGCGG GTATCGGGCG GCTGCTCGCC CCCGTTTTTC GCGCCATACA AGCGTTGCGC
TGGGGATTTG TGCTGTTGGC GCTCGCGGGT TTTGTATTAC TGGTGTGGCG GCACGATGCG
ATCTGGCAAA CCGGCCTGTC GGGTTTGAAT CCCATTTCCG GGCAGGCAAA AGCGATGGAT
GATGAACTGC GTGCCGACAT GAACGCCGAT GACGCCCGTT ATTTCATCGT GGCCAAGGCG
CCTACCCAGC AAGCGGCACT GGCCGCAGCC GAACGTATCG ATGCAGCCCT CGAACCGCTC
ATCAAGCAGG GCGTCCTCGC CCGTTTCGAT AGCCCGGCGA AATTCCTGCC CAGTGTCGCT
ACCCAGCGCG TGCGCCAGCA GGCACTGCCC GACAGCACCA CGCTCACTGA ACGATTGGAT
GCCGCCGTTC AGGGCCTGCC CATTAGTGCC AGCAAGCTCA AACCGTTTGT TGATGCCGTC
GAGCAGGCCC GCAAGCAAAC ACCGCTGACG CCAGCCGATC TTGAAGGCAC CTCGTTCGGT
CTTGCCGTCA GTGCCCTGCT GCAAAAGCAA AACGGTGAGT GGCTGACTTT GATTCGCCTG
TATGTCCCGT CTGTCGGCAC ACTCGATACT GCGCGTATCA CGGCTGCCCT TAAATCGAGC
GGTATATCCG ATGCCCTGTT CGTGGATAAA GACGCTGAAT CCAGCCGCCT GTTCAACAGC
TATCTGGAAA ACACTATTAC GTTGTCGCTG GCGGGCTTGC TTGGCATCGT CATTCTATTG
GGCTTCGTGT TGCGGCGTCC GGCCCGATTG ATCCGCGTGC TGCTGCCGTT GCTGGTGGCC
GTGGTGCTGG TGATGGCGGG GCTGAATCTG GCCGGAGAAA AACTCAATAT CCTCAATCTT
GTTGGCCTGC TGCTGATCGT CGCCATCGGT TCCAATTACG CCCTGTTCTT CAACCAGAAC
ACAGCGCCGG ATCACCAGAC ACTCGCCTCG CTGCTACTGG CCAACCTCAC CACGGTCATC
GCTTTTGGCA CGCTCGCCTT CTCGCAGTTA CCCATTCTTC ACGCCTTCGG CAGCACGGTC
GCACCGGGTG CTTTTCTGGC ACTGGTGGTA GCCGCCGCGT TCGCCAAACC CAACGCACCG
AAGGCGCCCG CATGA
|
|---|
| Protein sequence | MKHQGLEKMS WTERRLPVIG LWLLALALSL AVILHTRFTA DMSAFLPEHP TAAQAFLVDQ
IKDGAISRMI LIGIEGGDAA TRADASKALG NALRQSGLFT VVRNGDAPTR DQDKTLLFDH
RYLLSPDITP ERFTVAGLHE AIANGIDLLA SPFGMFSQTI FTRDPTAETF AIVGKLGQNT
GTDDAPRNQN GVWVSPDGKR SLMMLQTRAA GSDTDAMARA IEAVRADFSN AVKAHPDGSS
LRLLVSGAPV FSVDARALIK SDVERFSIIG SVAVMLLLLV VYRSFSMLVL GLLPVLTGIA
VAIATVSLGF GTVHGITIGF GTTLIGEAID YSIYYFIQTQ NAPKEGSAFR SAGRSEGMER
FWPTIRLGVL TSITGFAALL FSGFPGLAQI GLYSIAGLTT AALVTRFVLP HLGTARLNRH
SLAGIGRLLA PVFRAIQALR WGFVLLALAG FVLLVWRHDA IWQTGLSGLN PISGQAKAMD
DELRADMNAD DARYFIVAKA PTQQAALAAA ERIDAALEPL IKQGVLARFD SPAKFLPSVA
TQRVRQQALP DSTTLTERLD AAVQGLPISA SKLKPFVDAV EQARKQTPLT PADLEGTSFG
LAVSALLQKQ NGEWLTLIRL YVPSVGTLDT ARITAALKSS GISDALFVDK DAESSRLFNS
YLENTITLSL AGLLGIVILL GFVLRRPARL IRVLLPLLVA VVLVMAGLNL AGEKLNILNL
VGLLLIVAIG SNYALFFNQN TAPDHQTLAS LLLANLTTVI AFGTLAFSQL PILHAFGSTV
APGAFLALVV AAAFAKPNAP KAPA
|
|---|
| |