Gene Hneap_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0060 
Symbol 
ID8533173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp68056 
End bp68586 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID646382439 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_003261973 
Protein GI261854690 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGCG CGGTGCGTTA CGGTTTGTCG GTTCTGGTTT TTCTGTTCGC GGCGGCTACC 
CAGGCTGAGG TCTTGGCCGC GCCAATCAAG GTGGGTTATG TCAATTCGGT CGCGTTGATG
GAGCAGGCGC CGCAGGCGGA TATCGCCAAG CATGCGCTGG AACGAGAGTT TTCTCCTCGT
GAGCGGGAGA TTCGTGCATT GCAGCAGCAG GCTCAAACGT TGCAAGGGCG ACTCGACAAC
GGTGGGGCGA GTATGGGCGA CACTGAACGC AGCACGTTGC GCCAGCAACT CGACCAGAAA
ATGCTTCGTA TCCAGCAAAT GCAAAGCGAT TTCCAGGACG ATCTCAACCT AAAGAAAAAC
GAGGCGTTGG GCAAATTGCA GCAGGCTGTA TTGCAGGCAA TCAAGGATGT TGCCAAGACG
AATGGCTATC AACTGGTGCT TTCCGACGGG GTAGTTTATG CCGCGCCTTC CGTGGACATC
ACCAAGCTGG TGGCCGAGCG CTTGAAGCAA CTGGCCAAAG GGAAGCAATA G
 
Protein sequence
MDRAVRYGLS VLVFLFAAAT QAEVLAAPIK VGYVNSVALM EQAPQADIAK HALEREFSPR 
EREIRALQQQ AQTLQGRLDN GGASMGDTER STLRQQLDQK MLRIQQMQSD FQDDLNLKKN
EALGKLQQAV LQAIKDVAKT NGYQLVLSDG VVYAAPSVDI TKLVAERLKQ LAKGKQ