| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0040 |
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| Symbol | |
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| ID | 8533153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 46091 |
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| End bp | 47545 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646382419 |
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| Product | protease Do |
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| Protein accession | YP_003261953 |
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| Protein GI | 261854670 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAACCC AGATTCTTGT TGAAGCCATT CGTGCAGGCT TGCCGCGCCG TGGACGGCTT
TTGATGGCCG CCGCTCTGAT TGCCACACCG TTGATGGCGA TGACACCGGC GATCAGTTTT
GCCGACAACG GCGTCCCCGA TTATGTGCAG TTGGTAAAAC AGGCCAGCCC GTGGGTGGTC
AATATCAGCA GCGTGAGCAA TCCCAAAACC CAAGAAGCTT TTAACAACGG CGAAATGCCA
ACCTTTCCGC CAGGACCTGC GGGCGATATG TTCCGGCATT TTTTCCAAGA ACAAATGCCG
CAAATGAAGC GTGAACCGAT TCGCTCTCTG GGTTCGGGTT TTATTATTTC CGCCGATGGC
TACATTCTTA CCAACGCGCA TGTAGTCAAC GGCGCGGACA AAATCACGGT GCGATTGCCC
GATCAGCAAA CCTACAAGGC CAAAGTGATC GGCAAAGACA AACGCACCGA CATCGCGTTG
CTGAAAATCG ATGCGAAAAA TCTGCCTGTT GCCCCCATTG GCAACTCGGA TAATATCCAA
GTGGGCGAAT GGGTTCTTGC CATTGGCGAG CCTTTCGGGC TCGATCACAC CGCAACGCAC
GGCATCGTGT CTGCCCTGGG CCGCGATTTG CCCGATGAGA GCTACGTGCC CTTCATTCAA
ACCGATGCGC CCGTCAATCC GGGCAACTCG GGCGGTCCAT TGATCAATGC TAACGGCAAA
GTCATCGGCA TCAATTCGCA GATTTATACG AAATCTGGCG GGTTTATGGG GATCTCGTTT
GCGATTCCGA TCAATGTTGC CATGAACGTG GTCGATCAGA TCAAGTCTAC CGGTCATGTG
ACGCGAGGCT ATTTGGGCGT GTTGATCCAG CCGGTCACCT ACGATTTGGC GCAATCGTTC
GGTCTGGATA CCACCAAAGG CGCACTGGTG GCTAAGGTGG AGCCCAACAC ACCGGCGGCC
AAAGCAGGTC TAAAATCGGG CGATATCATT CTCAAGTTTA ACGGCAGCGA GATCAAACAC
TCCGGCGAAT TGCCCATCAT GGTTGGCATG TCGCCGATTG GCAAACCGGC CACCCTCACC
TTGATGCGCG ATGGCAAGCA GATGGAGCTT AATGTCACCA TCGAAAAGCT CGACAAGAAA
GCACTCGAAG CTGAATCGGG CACCAGTGAA GCCATTGAAA AAATGGGTCT TCAGGTCACC
GAACTCTCCC CAGACGAACT GCAGCAGCTG AACATCAAAT ACGGCATAAA AGTGAAAAGC
GTCAAAAATG ACTCGCAATT CGCATCGGTT ATTGCCCCCG GCGACATCCT GCTGGAAGTC
AATCGGATGC CGATGAAGTC TGCGACCGAT CTGAAAAAAG CGCTCGACAG TGCGCCGAAG
GACCGACCGA TTGCCATCCG GCTGTTGCGG GATGGTCAAC CGTTATTCAT GGCGGTTCAA
CTCGGTACTC AGTAA
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| Protein sequence | MRTQILVEAI RAGLPRRGRL LMAAALIATP LMAMTPAISF ADNGVPDYVQ LVKQASPWVV
NISSVSNPKT QEAFNNGEMP TFPPGPAGDM FRHFFQEQMP QMKREPIRSL GSGFIISADG
YILTNAHVVN GADKITVRLP DQQTYKAKVI GKDKRTDIAL LKIDAKNLPV APIGNSDNIQ
VGEWVLAIGE PFGLDHTATH GIVSALGRDL PDESYVPFIQ TDAPVNPGNS GGPLINANGK
VIGINSQIYT KSGGFMGISF AIPINVAMNV VDQIKSTGHV TRGYLGVLIQ PVTYDLAQSF
GLDTTKGALV AKVEPNTPAA KAGLKSGDII LKFNGSEIKH SGELPIMVGM SPIGKPATLT
LMRDGKQMEL NVTIEKLDKK ALEAESGTSE AIEKMGLQVT ELSPDELQQL NIKYGIKVKS
VKNDSQFASV IAPGDILLEV NRMPMKSATD LKKALDSAPK DRPIAIRLLR DGQPLFMAVQ
LGTQ
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