Gene Hneap_0025 details

Gene Information

• Locus tag: Hneap_0025
• ID: 8533138
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 29824
• End bp: 30381
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 646382404
• Product: single-strand binding protein
• Protein accession: YP_003261938
• Protein GI: 261854655
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.326087
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCACTC GTGGAATCAA CAAAGTCATT GTCCTGGGCA ATCTCGGGAA AGACCCGGAA 
GTCCGCTACA TGCCAAGCGG CGGGCAGGTG ACGAATATTA CCGTCGCCAC CTCCGAGACC 
TGGAAAGACA AGGACAGCGG TGAGCAGAAA GAAAACACAG AGTGGCACCG CATCGTATTC 
TTTGGCAAGT TGGCGGAAAT TGCTGGTCAA TACCTGAAAA AAGGCGGCCA GGTCTATGTG 
GAAGGCCGTC TGCAAACCCG CAAATGGCAA GGTCAGGATG GACAGGATCG TTACACCACC 
GAAATCGTCG CCAACGAGAT GCAAATGCTG GGCGGTCGTG GTGGTTCGGG TGGCTCCGGC 
GGCGGCCAGC AAGAATCGGG CGACTATGAA GACGATGGCT ATAGCAACAC ACCGCCTGCA 
CGTGGCGCCG GTCGTGCCGC CGCGGCACCT GCGCGCCCGT CAAGCGGCAA CCGCGACAGC 
TACGGCGCCC CGCCACCACC ACCGCGCAGC CCTGCTAAAT CCGAGCCGAA CTTTGTGGAT 
GACGATATTC CGTTCTAG 

 

Protein sequence

MATRGINKVI VLGNLGKDPE VRYMPSGGQV TNITVATSET WKDKDSGEQK ENTEWHRIVF 
FGKLAEIAGQ YLKKGGQVYV EGRLQTRKWQ GQDGQDRYTT EIVANEMQML GGRGGSGGSG 
GGQQESGDYE DDGYSNTPPA RGAGRAAAAP ARPSSGNRDS YGAPPPPPRS PAKSEPNFVD 
DDIPF