| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0019 |
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| Symbol | |
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| ID | 8533132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 20656 |
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| End bp | 24519 |
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| Gene Length | 3864 bp |
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| Protein Length | 1287 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646382398 |
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| Product | putative type 4 fimbrial biogenesis protein PilY1 |
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| Protein accession | YP_003261932 |
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| Protein GI | 261854649 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.582284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAT CAAATAAAAA CACGCAAATT AAACGCAGCA AGCGGCACAT GAGATACGCA
AGGGGAAATA CGATGAACTT TTTGCACACA ACAATGCAGC AAGTGGGCAG GGTCGCAGTG
CGGTTTTTCG CGTTTGCATT GCTCACAGCC ATGCCGATGA TAACCGCCCA AGCAGCAGTT
GACATTGACC AAAGCCCTTT GATTCTGCAA AAACCCTTGC CGCCCAATAT TGTGCTGATG
CTGGACGATT CTGGTTCGAT GACGTGGGAT TACATGCCGG ATTTTGGCTA TTTAAAAAAC
AATAGTAATA ATGATGCGTT AATAAATTCG GCTAATAATT CGGTTTATTA CGATCCAACC
ATAACTTACT TGCCGCCATT AAAAGCTGAT AATACAAGCT ACACCAATCA AACTGATTTT
ACCAACACGC CCGTTGATGG CTTTGGAACT ACATCAAATG ATATGATTGA TTTGACCAAT
TATAATGGAT ATGACGATAC TGGGAATATT AATTATTCAA AATCCGTGCT AACAAATTCT
TCTTATACTA AAACCGGAAT AAGTAGAATT GACTGCTACA TTTTATATTA TAACGATCAA
ACTGCATACG ATTATAGCTA CAGTAGAGCG AGAAAAAGCC GGCCATCTAG CTGTACAATT
TACACTCAGG TTAGCTCTGG GTATTTTCAA TATTCTACAG GCCCTGCGGC GGGCCCCTAC
ACCGTGCATT ATGTGGCAAA CACCAGTTGC GGCACGCAAT CTAATTGCGT AGTTGCTTCC
GATAAATCTG GAGTATCGGC ACCTATTGGT GTTGCTGCTG GTAATAATAT CGCCAACTGG
TTCGCCTATT ACCATACTCG TATATTAACG ACTAAAACTG GGTTGACATT AGCCTTTTCC
GGCCTTGACA AAACCTATCG TTTTGGCTTT GCCTCGATTA ACGGGAGAAA CACGGCGGAT
ATCCCATCAC CCCAATACTC TTTCTCAACA AGCAATAATT CAGATAACAA ATTAGCAGAA
GTTCAGCCCT TTGGTGATGG TAGTAGCGGC ACTCAAAAAG CCAAGTTCTG GACATGGATA
ACCAACATCT CCCCCAATGA TGGCACACCT TTACGCGGCG CTCTGCAGGC TGTGGGTGAA
TATTACAAAA CACAGCAGCC GTGGGAGACT TCGAGTTCCG ATACATCAGA ATACGCTTGC
CGCCCCAGTT ACACCATTTT AACGACAGAT GGTTTCTGGA ATGGCGATAC CCCAAGCGGG
ATTGGCAATG CTGACGGTCA AAATGGGCCG AAAATCACCA CGCCATCAAC CTATCAATAT
CTTAAAACCG CTCCGTATCA GGATGGTTAT AGCGATACGC TGGCCGATGT CGCAATGAAG
TATTGGGAAA CCGATTTGCG CACATCGGTT GCCAACGAGG TGCCCACCAC CCCGAGTGAC
CCCGCTTTCT GGCAGCATAT GACCACCTTT ACCATTGGCT TGGGCTGGGA CCCGACCAAC
TTGATACGTT CAACATCAGG TGATGCTAAT TTGACCGTGC CACAAATATT GGCCTGGGCG
CGCAGCGGCA ACCCACCCGC TGGCTCTTCG CTTACAAACT CCAGCAATAT CTGGCCAAAA
CCTACGTCCA ACAGTATTAA TAATATTGCA GATCTGGCGC ATGCGGCCGT TAATGGCCAC
GGCGAATTCT ACTCGGTTAA ATCACCTGAT GATTTGGTTA ATGGCCTGCA ATCTGCCTTG
AAAAAAATTG GCGAAAGCCC CGGCGCGGGC AACGCCGTAA CCTTGTCGGA TACGGCGCTA
CCGACAGATT CTACGGCGGC CGACGCGCTG TATCGGTTTC GGGGTACGTT TTATACGGGC
CAATGGTCTG GAACGCTCAC AGCGGAAAAT TACACGACCA CGACCACGCC CCCCAGTTAT
GAGTCGTTTT GGTCCACAAA AGATTTGACC CCCTCATTTT CGACCGTTGG TACGGGCAGC
AGCGCGGAGC GGCTAAGTAA CCGCAACGTG TGGACATCCA CGCTCGGCAA CGGCAACAAA
ACCTCGTCGG TCGCGTTCCG TGTGGCAACT GATTTAAGCG CAACTCAGCA AACTGACTTG
GCGGCTACCA TTGGCAACAG TAGTGTGACC GCTCAAACCA TGGTGAATTA CTTGTTGGGT
GATAGCACAT ACGCCCAAGG CAATCCGGGC GGCACGCTGC GTAATCGCGA TAGTTTTTTG
GGTGATATTG TTTCTTCGAC ACCGGTATTG ATTGCCGCGC CGCAAGCGGA TTTGTATGCA
GGCACTACCT TTACGGGCGC CGATACGTAT TCTACTTTTG TGAACAAAGA GGCCACCCGT
GCGCCCATTG TTTATGTGGC CGCCAATGAT GGCATGCTGC ATGCCTTTCG GGTAACGGCG
GGCGCGGGGT ATGAGCGCGA TGGCAGCACG GTTAGCCCAG TGGCTGATCA GGCCAAGGGC
ACGGAGGTTT ATGCCTACAT GCCTTCGGCG GTGCTCACGC AAACAGGTGA TGCCAGCATT
ACCAACCTGG CTAACCCGAA ATATGGCGAT GTGGACCCGG TAAATGGCAC ACAGGCTGTG
CCGCATCAAT ATTACAACGA TGGCCGAATT ACCACACAGA ATGTGTATTT TGACAAAGCA
TGGCACACCG TTTTGGTGGG CACCACGGGG CGTGGGCCTG CCAAAGCAAT TTACGCGCTG
GATATTACCG ATCCTTCGGT GTTGATGAAC CCGGCTACTG CTGATCAGGC GCTATTGTGG
GAGCGCTCTG CCGGCGATGG TAAAACAGGC AGCAGTTATA TTGGTGAAAT GGTTGGCACC
CCAGTCATTG CGCAAGTTGA TCAAGGCGGT CAACCCTCCT GGGCTGTATT TGTGGGCAAT
GGTTATAACA GTGCCGAAGG CAAGCCCGCC TTGCTGCAGT TCGATCTGCA AACGGGTGAT
TTGAGCGTTC ACACAACCAC CGGTTCTGTT GCTGCGGATG GCGGCCTTGC CGAACCGGGT
TTGATGCAAG GGGATAAAAC AACTGGCATA AGCACTTATG CGTTCGCAGG CGATTTGCAA
GGCCATTTGT GGAAGTTTAA TTTAGATTCT GCCAGTAGCA CGGGTTCGGT AGCGTTTAAT
GCCGTGGACG ATAAGGGCAA CGCACAGCCG ATTACCTCAC TTGTTACCTT GGCTTACGAT
GGCGTCACAA ATAGCACCTT TGCCTTGTTT GGTACCGGCA AATATTTGGC AAGCGCCGAT
ACAAAAGACG ATCAAGTGCA AACCTGGTAT GGCGTGCGCG TGGGCATGGG GGCTGATTTG
GCAGGCGTGG CATCTGCGAC AACGCCTGTG GCCGATAGCA GCACCGCCCG CAGTGATTTG
ACCGAGCGAT TCGCGTTTGA TTTTGCATCG GGTGATCGTG CCACCAGTGC CCAAACCTCA
GATACGGATA TGAATAATAA AGCAGGGTGG TTTATGGACT TGCCGCAAAC CGGCGAGCGC
ATCGTGAACC GCATCCAGTT AATTAGTGGT AAAGCGGTGG CTACCACGCT TATTCCTAAG
GTGAATGACC CCTGTAACAC CGTGCCTGCG GGCGCTGTGA TGGGTGTCGA TCCGTTCACC
GGCGCTAATC AGTTGGTGAG CACAGGTAAC GGGTATAATT TGGGCACCAA AATAATTACG
GTTGATGGTA AACCGCAGCA AGTTGCGATT AATGGCAAAG TGTTTGACGC AGGCCCAGCC
GCTGGTGTCA CTGCGGTACG AAATGCTGAT GGTACGATTT CAATTACCTT CAATACCTTG
GGCGGCGGCT TGCAAAGCTT GGGCCCATTA AATTTGGGTG GTAATCAGGC GAGTCGGTTA
TCGTGGCGTG AGCTTACAAA CTGA
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| Protein sequence | MNQSNKNTQI KRSKRHMRYA RGNTMNFLHT TMQQVGRVAV RFFAFALLTA MPMITAQAAV
DIDQSPLILQ KPLPPNIVLM LDDSGSMTWD YMPDFGYLKN NSNNDALINS ANNSVYYDPT
ITYLPPLKAD NTSYTNQTDF TNTPVDGFGT TSNDMIDLTN YNGYDDTGNI NYSKSVLTNS
SYTKTGISRI DCYILYYNDQ TAYDYSYSRA RKSRPSSCTI YTQVSSGYFQ YSTGPAAGPY
TVHYVANTSC GTQSNCVVAS DKSGVSAPIG VAAGNNIANW FAYYHTRILT TKTGLTLAFS
GLDKTYRFGF ASINGRNTAD IPSPQYSFST SNNSDNKLAE VQPFGDGSSG TQKAKFWTWI
TNISPNDGTP LRGALQAVGE YYKTQQPWET SSSDTSEYAC RPSYTILTTD GFWNGDTPSG
IGNADGQNGP KITTPSTYQY LKTAPYQDGY SDTLADVAMK YWETDLRTSV ANEVPTTPSD
PAFWQHMTTF TIGLGWDPTN LIRSTSGDAN LTVPQILAWA RSGNPPAGSS LTNSSNIWPK
PTSNSINNIA DLAHAAVNGH GEFYSVKSPD DLVNGLQSAL KKIGESPGAG NAVTLSDTAL
PTDSTAADAL YRFRGTFYTG QWSGTLTAEN YTTTTTPPSY ESFWSTKDLT PSFSTVGTGS
SAERLSNRNV WTSTLGNGNK TSSVAFRVAT DLSATQQTDL AATIGNSSVT AQTMVNYLLG
DSTYAQGNPG GTLRNRDSFL GDIVSSTPVL IAAPQADLYA GTTFTGADTY STFVNKEATR
APIVYVAAND GMLHAFRVTA GAGYERDGST VSPVADQAKG TEVYAYMPSA VLTQTGDASI
TNLANPKYGD VDPVNGTQAV PHQYYNDGRI TTQNVYFDKA WHTVLVGTTG RGPAKAIYAL
DITDPSVLMN PATADQALLW ERSAGDGKTG SSYIGEMVGT PVIAQVDQGG QPSWAVFVGN
GYNSAEGKPA LLQFDLQTGD LSVHTTTGSV AADGGLAEPG LMQGDKTTGI STYAFAGDLQ
GHLWKFNLDS ASSTGSVAFN AVDDKGNAQP ITSLVTLAYD GVTNSTFALF GTGKYLASAD
TKDDQVQTWY GVRVGMGADL AGVASATTPV ADSSTARSDL TERFAFDFAS GDRATSAQTS
DTDMNNKAGW FMDLPQTGER IVNRIQLISG KAVATTLIPK VNDPCNTVPA GAVMGVDPFT
GANQLVSTGN GYNLGTKIIT VDGKPQQVAI NGKVFDAGPA AGVTAVRNAD GTISITFNTL
GGGLQSLGPL NLGGNQASRL SWRELTN
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