Gene Hneap_0018 details

Gene Information

• Locus tag: Hneap_0018
• ID: 8533131
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 20011
• End bp: 20643
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 646382397
• Product: putative Tfp pilus assembly protein
• Protein accession: YP_003261931
• Protein GI: 261854648
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4726] Tfp pilus assembly protein PilX

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGG TGGCTTTGCG AAAGGGGGAG GCGAGTACGG TGGCCTTGCG AAAAGGGAGG 
GGTGAGCGTG GTGGCTTTAT GAAAACTGGC CTCGATCGCC AGCGCGGCGT CGCGCTGGTC 
GTCGCGCTGG TGCTGCTTGT GGTGGTTACG CTGGTTGGCT TGGCTGCCAT TCGCGGCACT 
ACTATGCAGC AGCAAATGAC CAGCAATTTT TACGATCGTG AAATTGGCTT TCAAGCGGCC 
GAAGCAGGCT TGCGCACGGG GGAGAGCTGG CTGATAGCCA ACCCGAACAA CACAACACTG 
ATACGAGATT GTTCCGACCC AAACAATCAG TGTTTCGCCA ACCCGTTCGA AACCGGCGCT 
GCCACTGCGG GAATAATCCA AGCGGTGCCC ACCGCAACTT TTGATGCGGG CGCTTTGGGC 
GCGGGGCAGC CCCAATATGT GGTCGAAAAA ATGGGTATTT GCAATTCGGG CGGTGGGGGC 
AATTTTGCAT TCACGAACGA TCAAAATAAT CAGGGCGGTG GCAACTCGCT TGTGTCATCC 
GGTATGTGCT ACCGCGTTAC CGCAGAAAGC AATGCCAATG CCGCCGCCAA TGACCGATCT 
AACGTGATAT TGCAATCCAT CTTGCGCCTG TAG 

 

Protein sequence

MSAVALRKGE ASTVALRKGR GERGGFMKTG LDRQRGVALV VALVLLVVVT LVGLAAIRGT 
TMQQQMTSNF YDREIGFQAA EAGLRTGESW LIANPNNTTL IRDCSDPNNQ CFANPFETGA 
ATAGIIQAVP TATFDAGALG AGQPQYVVEK MGICNSGGGG NFAFTNDQNN QGGGNSLVSS 
GMCYRVTAES NANAAANDRS NVILQSILRL